# Export date: 2026-06-13 03:03:56 # Microbe: Ruminococcus_C_58660 (ID: 7576) # Total amplicons: 25 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20024 SRR10030031 AMPLICON PRJNA562320 Seaweed 5.3642786N 100.3590184E Malaysia: Pulau Pinang\, Pulau Korea 2016/05/11 Gracilaria sp. Plant 72802000 SAMN12638441 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030031 20025 SRR10030032 AMPLICON PRJNA562320 Seaweed 5.6195748N 100.2949879E Malaysia: Kedah\, Kuala Muda 2016/05/10 Gracilaria sp. Plant 76830000 SAMN12638440 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030032 14921 SRR12400118 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 92957645 SAMN15718367 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400118 14922 SRR12400119 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 84499999 SAMN15718366 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400119 14923 SRR12400120 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 94604080 SAMN15718365 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400120 14925 SRR12400122 AMPLICON PRJNA650560 Mangrove 13.83679 S 39.2621 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 50799976 SAMN15718363 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400122 14926 SRR12400123 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 91406705 SAMN15718362 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400123 14928 SRR12400125 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 97654572 SAMN15718360 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400125 18985 SRR13958805 AMPLICON PRJNA713958 Mangrove China: Hainan island 2025/12/17 Mangrove/intertidal mudflats mangrove forest and intertidal mudflats sediments 28822500 SAMN18275835 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13958805 14848 SRR15928165 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/24 coral coral 148910299 SAMN21466953 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928165 24024 SRR19242054 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 49860000 SAMN28462874 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242054 24025 SRR19242055 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50681000 SAMN28462873 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242055 24057 SRR19242087 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 37160500 SAMN28462844 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242087 24058 SRR19242088 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 33853000 SAMN28462843 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242088 24060 SRR19242090 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 33253500 SAMN28462841 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242090 24089 SRR21686195 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass Bulk_soil 59957042 SAMN30916016 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686195 24258 SRR23829713 AMPLICON PRJNA944167 Seagrass 2.55878 S 107.66886 E Indonesia: Belitung 2010-07 Syringodium isoetifolium plant 40662692 SAMN33739265 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829713 24262 SRR23829717 AMPLICON PRJNA944167 Seagrass 2.55878 S 107.66886 E Indonesia: Belitung 2010-07 Syringodium isoetifolium plant 43348816 SAMN33739261 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829717 17994 SRR23945133 AMPLICON PRJNA947804 Mangrove 12.83774 S 45.190182 E Mayotte: Dembeni 2025/11/18 marine biofilm Slimy biofilm on Rhizopoha 12511001 SAMN33866977 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945133 16855 SRR26222186 AMPLICON PRJNA1021532 Mangrove 15.2933 N 73.4958 E India 2020/08/05 Mangrove mangrove sediment 871077000 SAMN37558049 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222186 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 18450 SRR27644543 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/23 Mangrove soil 16002074 SAMN39505450 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644543 17790 SRR4858369 AMPLICON PRJNA351850 Mangrove 21.67 N 88.15 E India:West Bengal'' 2014/07/25 bacterioplankton Mooriganga estuary in Sundarbans mangrove ecoregion 561760176 SAMN05954869 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858369 17791 SRR4858370 AMPLICON PRJNA351850 Mangrove 21.74 N 88.14 E India: West Bengal'' 2014/07/25 bacterioplankton Chemaguri creek in Sundarbans mangrove ecoregion 557254391 SAMN05954868 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858370 17315 SRR5319009 AMPLICON PRJNA351850 Mangrove 22.08 N 88.76 E India: West Bengal 2015/08/01 fresh water surface water 149019156 SAMN06448879 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319009