# Export date: 2026-06-14 02:36:21 # Microbe: Ruminococcus_D Ruminococcus_D bicirculans (ID: 7582) # Total amplicons: 12 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20025 SRR10030032 AMPLICON PRJNA562320 Seaweed 5.6195748N 100.2949879E Malaysia: Kedah\, Kuala Muda 2016/05/10 Gracilaria sp. Plant 76830000 SAMN12638440 PAIRED Illumina HiSeq 1000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10030032 23514 SRR11742202 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 49800412 SAMN14819899 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742202 19985 SRR12033797 AMPLICON PRJNA639819 Seaweed 43.5N 6.5E France: Carqueiranne 2017/03/01 Water Seawater 31803500 SAMN15250106 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033797 23668 SRR12089226 AMPLICON PRJNA641835 Seagrass NA China:Hainan\,Xincun Thalassia hemperichii sediment 21516081 SAMN15367931 SINGLE Ion Torrent S5 XL GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12089226 14921 SRR12400118 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 92957645 SAMN15718367 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400118 14923 SRR12400120 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 94604080 SAMN15718365 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400120 14924 SRR12400121 AMPLICON PRJNA650560 Mangrove 13.83679 S 39.2621 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 52601681 SAMN15718364 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400121 14926 SRR12400123 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 91406705 SAMN15718362 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400123 14927 SRR12400124 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 98301057 SAMN15718361 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400124 14928 SRR12400125 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 97654572 SAMN15718360 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400125 24061 SRR19242091 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 31252500 SAMN28462840 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242091 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187