# Export date: 2026-06-15 15:50:23 # Microbe: Sedimentibacter Sedimentibacter acidaminivorans (ID: 7648) # Total amplicons: 43 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 15020 SRR12164887 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 102329488 SAMN15447435 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164887 20616 SRR12228798 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 133311500 SAMN10953563 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228798 14931 SRR12708811 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 16757500 SAMN16261218 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708811 14933 SRR12708813 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 24180000 SAMN16261215 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708813 14935 SRR12708815 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 25411000 SAMN16261213 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708815 21204 SRR12852706 AMPLICON PRJNA670253 Saltmarsh 30.05833N 89.79194W USA: New Orleans\, LA 2018-06-15 sediment 119611310 SAMN16490730 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852706 20903 SRR12852710 AMPLICON PRJNA670253 Saltmarsh 30.05833N 89.79194W USA: New Orleans\, LA 2018-06-15 sediment 21769991 SAMN16490726 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852710 21213 SRR12852731 AMPLICON PRJNA670253 Saltmarsh 29.33139N 90.69028W USA: Cocodrie\, LA 2018-06-14 sediment 11170032 SAMN16490706 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852731 20969 SRR12852837 AMPLICON PRJNA670253 Saltmarsh 29.33139N 90.69028W USA: Cocodrie\, LA 2018-06-14 sediment 7197138 SAMN16490712 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852837 21522 SRR12995337 AMPLICON PRJNA666636 Saltmarsh 31.97372N 81.031W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 38338744 SAMN16678384 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995337 21554 SRR12995370 AMPLICON PRJNA666636 Saltmarsh 31.9753N 81.03085W USA: Georgia 2019-07-22 Sporobolus alterniflorus sediment 44386840 SAMN16678354 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995370 15222 SRR14740909 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Sediment 77562000 SAMN19581105 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740909 23747 SRR18298268 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 16889876 SAMN22568717 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298268 23749 SRR18298270 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 24239560 SAMN22568715 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298270 23866 SRR18298387 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 19169404 SAMN22568837 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298387 23874 SRR18298395 AMPLICON PRJNA774145 Seagrass 19.51136 N 85.15342 E India 2018-04-21 seagrass sediment 10306560 SAMN22568849 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298395 23878 SRR18298399 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 7759970 SAMN22568846 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298399 23948 SRR18298469 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 16881012 SAMN22568728 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298469 23949 SRR18298470 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 13161873 SAMN22568729 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298470 23970 SRR18298491 AMPLICON PRJNA774145 Seagrass 19.5113 N 85.14544 E India 2018-04-21 seagrass sediment 13907901 SAMN22568725 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298491 23972 SRR18298493 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 12507265 SAMN22568727 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298493 22029 SRR22025434 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 78802686 SAMN31431895 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025434 22032 SRR22025438 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 68085240 SAMN31431892 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025438 22033 SRR22025439 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 69019516 SAMN31431891 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025439 22035 SRR22025441 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 92464530 SAMN31431889 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025441 22036 SRR22025442 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 88512415 SAMN31431888 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025442 22048 SRR22025457 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 68284997 SAMN31431830 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025457 22058 SRR22025468 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 66709287 SAMN31431829 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025468 22089 SRR22025501 AMPLICON PRJNA893704 Saltmarsh 38.76607N 76.381W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 65303370 SAMN31431826 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025501 18129 SRR25728359 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 41232184 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728359 21627 SRR26165212 AMPLICON PRJNA1019769 Saltmarsh USA:Delaware\,St Jones Reserve 2020 sediment 10589941 SAMN37494740 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR26165212 16855 SRR26222186 AMPLICON PRJNA1021532 Mangrove 15.2933 N 73.4958 E India 2020/08/05 Mangrove mangrove sediment 871077000 SAMN37558049 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222186 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 22164 SRR27176340 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 49892514 SAMN38763919 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176340 22354 SRR28821059 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-19 salt marsh soil 74241048 SAMN41100927 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821059 21701 SRR5360931 AMPLICON PRJNA379357 Saltmarsh 53.76195N 7.72287E Germany: Spiekeroog 2015 Salt marsh sediment 157372512 SAMN06606307 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360931 21978 SRR5486598 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 30418690 SAMN06843698 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486598 21989 SRR5486609 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 73176540 SAMN06843687 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486609 21992 SRR5486613 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 78760286 SAMN06843683 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486613 21995 SRR5486618 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 58607998 SAMN06843678 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486618 21996 SRR5486619 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 44599186 SAMN06843677 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486619 21997 SRR5486620 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 83702476 SAMN06843676 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486620 22143 SRR6761107 AMPLICON PRJNA433990 Saltmarsh 29.927611N 88.829306W USA: Chandeleur Islands 2016-05-24 salt marsh sediment 223977712 SAMN08536658 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761107