# Export date: 2026-06-15 10:10:02 # Microbe: Abiotrophia Abiotrophia defectiva (ID: 7737) # Total amplicons: 30 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19552 ERR2508764 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 2285845 SAMEA1100071 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508764 19596 ERR2508808 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 9153957 SAMEA1100116 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508808 19890 SRR10093022 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 12533866 SAMN12716448 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10093022 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 14922 SRR12400119 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 84499999 SAMN15718366 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400119 14925 SRR12400122 AMPLICON PRJNA650560 Mangrove 13.83679 S 39.2621 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 50799976 SAMN15718363 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400122 14927 SRR12400124 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 98301057 SAMN15718361 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400124 14864 SRR15928181 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 79986088 SAMN21466992 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928181 14865 SRR15928182 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 73141666 SAMN21466991 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928182 14878 SRR15928195 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 79482525 SAMN21466979 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928195 14919 SRR15928236 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/24 coral coral 20909225 SAMN21466948 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928236 20494 SRR27942810 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Spyridia sp. host associated 18145974 SAMN39854519 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942810 20515 SRR27942831 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Sarconema sp. host associated 18288760 SAMN39854491 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942831 16833 SRR28031513 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 36069900 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031513 16834 SRR28031514 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 36069900 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031514 16835 SRR28031515 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 50093700 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031515 16836 SRR28031516 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 50093700 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031516 16839 SRR28031519 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 48932700 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031519 16841 SRR28031521 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 40207200 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031521 16842 SRR28031522 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 48932700 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031522 16845 SRR28031525 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 70106100 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031525 16851 SRR28031531 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 45090900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031531 16852 SRR28031532 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 45090900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031532 15865 SRR5814410 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 43100294 SAMN07338398 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814410 21915 SRR6398161 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837605W USA 2013-07-07 Salt marsh sediment 2978461 SAMN08214137 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398161 21923 SRR6398170 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837601W USA 2013-07-07 Salt marsh sediment 9170076 SAMN08214133 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398170 21925 SRR6398172 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383766W USA 2013-07-07 Salt marsh sediment 6144654 SAMN08214129 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398172 21928 SRR6398175 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383769W USA 2013-07-07 Salt marsh sediment 5747452 SAMN08214132 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398175