# Export date: 2026-06-15 14:16:31 # Microbe: Lactococcus_A_343306 (ID: 7789) # Total amplicons: 83 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 23359 SRR11354739 AMPLICON PRJNA613355 Seagrass 37.35 N 122.57 E China:Rongcheng 2019-06-10 Zostera marina sediment 43081528 SAMN14404009 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11354739 14926 SRR12400123 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 91406705 SAMN15718362 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400123 20913 SRR12852730 AMPLICON PRJNA670253 Saltmarsh 30.05833N 89.79194W USA: New Orleans\, LA 2018-06-15 sediment 45901623 SAMN16490724 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852730 20709 SRR13380063 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 37883305 SAMN17251773 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380063 23740 SRR15068650 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Zostera marina sediment 330422203 SAMN20115034 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068650 16750 SRR15306182 AMPLICON PRJNA750750 Mangrove 25.54280 S 48.29905 W Brazil: Ilha do Mel 2018/04/28 Mangrove estuarine mud 18583833 SAMN20486498 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15306182 14861 SRR15928178 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 94374990 SAMN21466995 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928178 21311 SRR1756883 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 22924500 SAMN03283771 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756883 22064 SRR22025474 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.37022W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60544144 SAMN31431859 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025474 22266 SRR27176451 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 44640432 SAMN38763899 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176451 20042 SRR4044252 AMPLICON PRJNA338162 Seaweed 23.4681N 117.1006E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 36118398 SAMN05521705 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4044252 20043 SRR4045611 AMPLICON PRJNA338162 Seaweed 23.4681N 117.1006E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 51646764 SAMN05521706 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4045611 19396 SRR4096441 AMPLICON PRJNA338162 Seaweed 23.4681N 117.1006E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 44586134 SAMN05521707 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4096441 20028 SRR4105458 AMPLICON PRJNA338162 Seaweed 23.4681N 117.1006E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 51275284 SAMN05521709 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105458 20029 SRR4105461 AMPLICON PRJNA338162 Seaweed 23.4681N 117.1006E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 41499336 SAMN05521710 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105461 20030 SRR4105463 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 26113036 SAMN05521711 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105463 20031 SRR4105464 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 23397216 SAMN05521712 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105464 20032 SRR4105465 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 48452036 SAMN05521713 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105465 20033 SRR4105466 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 37133442 SAMN05521714 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105466 20034 SRR4105467 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 32480404 SAMN05521715 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105467 20035 SRR4105469 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 42619800 SAMN05521716 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105469 20038 SRR4105475 AMPLICON PRJNA338162 Seaweed 23.4681N 117.1006E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 sediment 58606994 SAMN05521719 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105475 21989 SRR5486609 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 73176540 SAMN06843687 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486609 15848 SRR5814386 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 71881980 SAMN07338410 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814386 22971 SRR7550350 AMPLICON PRJNA482222 Seagrass 55.58 N 3.4 W United Kingdom: Scotland 2015-11 seagrass Sediment 123580129 SAMN09700805 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7550350 23043 SRR8072089 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Shanhu Island) 2015-06-01 Halophila ovalis rhizosphere 39696000 SAMN10252284 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072089 23044 SRR8072090 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Shanhu Island) 2015-06-01 Halodule uninervis rhizosphere 36848400 SAMN10252285 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072090 23045 SRR8072091 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Zhaoshu Island) 2015-06-01 Halophila ovalis rhizosphere 44997000 SAMN10252280 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072091 23046 SRR8072092 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Zhaoshu Island) 2015-06-01 Halophila ovalis rhizosphere 40135200 SAMN10252281 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072092 23047 SRR8072093 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Zhaoshu Island) 2015-06-01 Halophila ovalis rhizosphere 47016600 SAMN10252282 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072093 23048 SRR8072094 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Shanhu Island) 2015-06-01 Halophila ovalis rhizosphere 35492400 SAMN10252283 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072094 23049 SRR8072095 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Rock Island) 2015-05-31 Thalassia hemprichii rhizosphere 60573000 SAMN10252276 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072095 23050 SRR8072096 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-31 Halophila ovalis rhizosphere 37366800 SAMN10252277 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072096 23051 SRR8072097 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-31 Halophila ovalis rhizosphere 38293200 SAMN10252278 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072097 23052 SRR8072098 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-31 Halophila ovalis rhizosphere 32297400 SAMN10252279 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072098 23053 SRR8072099 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Yongxing Island) 2015-05-30 Thalassia hemprichii rhizosphere 42555000 SAMN10252265 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072099 23054 SRR8072100 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Halodule uninervis rhizosphere 52056000 SAMN10252264 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072100 23055 SRR8072101 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-06-02 Thalassia hemprichii rhizosphere 48432000 SAMN10252259 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072101 23056 SRR8072102 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-06-15 Halophila ovalis rhizosphere 39720000 SAMN10252258 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072102 23057 SRR8072103 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-06-15 Halophila ovalis rhizosphere 43322400 SAMN10252257 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072103 23058 SRR8072104 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-06-15 Halophila ovalis rhizosphere 42607800 SAMN10252256 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072104 23059 SRR8072105 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Halodule uninervis rhizosphere 52518600 SAMN10252263 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072105 23060 SRR8072106 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Halodule uninervis rhizosphere 47058000 SAMN10252262 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072106 23061 SRR8072107 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-06-02 Thalassia hemprichii rhizosphere 33969600 SAMN10252261 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072107 23062 SRR8072108 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-06-02 Thalassia hemprichii rhizosphere 46817400 SAMN10252260 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072108 23063 SRR8072109 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Rock Island) 2015-05-31 Thalassia hemprichii rhizosphere 55763400 SAMN10252275 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072109 23064 SRR8072110 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Rock Island) 2015-05-31 Thalassia hemprichii rhizosphere 53914200 SAMN10252274 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072110 23065 SRR8072111 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Yongxing Island) 2015-05-30 Thalassia hemprichii rhizosphere 50875200 SAMN10252267 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072111 23066 SRR8072112 AMPLICON PRJNA497291 Seagrass NA China: South China Sea (Yongxing Island) 2015-05-30 Thalassia hemprichii rhizosphere 47500800 SAMN10252266 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072112 23067 SRR8072113 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Halophila ovalis rhizosphere 43389600 SAMN10252269 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072113 23068 SRR8072114 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Halophila ovalis rhizosphere 47515200 SAMN10252268 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072114 23069 SRR8072115 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Syringodium isoetifolium rhizosphere 51709200 SAMN10252271 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072115 23070 SRR8072116 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Halophila ovalis rhizosphere 48612600 SAMN10252270 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072116 23071 SRR8072117 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Syringodium isoetifolium rhizosphere 54843600 SAMN10252273 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072117 23072 SRR8072118 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2015-05-30 Syringodium isoetifolium rhizosphere 47800200 SAMN10252272 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072118 23073 SRR8072119 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-19 Halodule uninervis rhizosphere 44079000 SAMN10252289 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072119 23074 SRR8072120 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-18 Thalassia hemprichii rhizosphere 31850400 SAMN10252288 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072120 23075 SRR8072121 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-18 Thalassia hemprichii rhizosphere 283685400 SAMN10252287 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072121 23076 SRR8072122 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-18 Halodule uninervis rhizosphere 34096800 SAMN10252286 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072122 23077 SRR8072123 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-19 Halophila ovalis rhizosphere 60912600 SAMN10252293 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072123 23078 SRR8072124 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-19 Halophila ovalis rhizosphere 59372400 SAMN10252292 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072124 23079 SRR8072125 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-19 Halodule uninervis rhizosphere 45043200 SAMN10252291 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072125 23080 SRR8072126 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-19 Halodule uninervis rhizosphere 45755400 SAMN10252290 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072126 23081 SRR8072127 AMPLICON PRJNA497291 Seagrass NA China: South China Sea 2016-08-19 Halophila ovalis rhizosphere 58983000 SAMN10252294 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8072127