# Export date: 2026-06-15 10:44:45 # Microbe: Thermoactinomyces_A Thermoactinomyces_A vulgaris (ID: 7894) # Total amplicons: 26 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19665 SRR10092797 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 2798259 SAMN12716453 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092797 19695 SRR10092827 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 14810885 SAMN12716565 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092827 19774 SRR10092906 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 5218819 SAMN12716567 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092906 19891 SRR10093023 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 8588923 SAMN12716447 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10093023 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 15650 SRR14741340 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 60052200 SAMN19580948 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741340 23726 SRR15068636 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Degradation sediment 479592223 SAMN20115047 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068636 21297 SRR1756788 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 11013450 SAMN03283757 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756788 21298 SRR1756790 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 11156250 SAMN03283758 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756790 21299 SRR1756792 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 7095750 SAMN03283759 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756792 21301 SRR1756860 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 11683650 SAMN03283761 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756860 21310 SRR1756870 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 10595250 SAMN03283770 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756870 21311 SRR1756883 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 22924500 SAMN03283771 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756883 21317 SRR1756935 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 18823050 SAMN03283777 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756935 21319 SRR1756937 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 21411300 SAMN03283779 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756937 21321 SRR1756940 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 10738800 SAMN03283781 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756940 21335 SRR1756957 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 15801300 SAMN03283796 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756957 22040 SRR22025447 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.36911W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 75468584 SAMN31431884 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025447 22059 SRR22025469 AMPLICON PRJNA893704 Saltmarsh 38.7474N 76.37045W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 64270004 SAMN31431864 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025469 22062 SRR22025472 AMPLICON PRJNA893704 Saltmarsh 38.74644N 76.36811W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 56429783 SAMN31431861 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025472 22064 SRR22025474 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.37022W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60544144 SAMN31431859 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025474 22067 SRR22025477 AMPLICON PRJNA893704 Saltmarsh 38.76422N 76.38453W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 57411505 SAMN31431856 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025477 22070 SRR22025481 AMPLICON PRJNA893704 Saltmarsh 38.7613N 76.38105W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 55304704 SAMN31431853 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025481 18056 SRR25728286 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 39333476 SAMN37055102 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728286 16855 SRR26222186 AMPLICON PRJNA1021532 Mangrove 15.2933 N 73.4958 E India 2020/08/05 Mangrove mangrove sediment 871077000 SAMN37558049 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222186 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187