# Export date: 2026-06-13 07:21:26 # Microbe: Roseomonas_A_507136 Roseomonas aquatica (ID: 8006) # Total amplicons: 53 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21614 ERR12080757 AMPLICON PRJEB66381 Saltmarsh 53.75979908N 7.7155871E 2019-07-15 salt marsh sediment 36331976 SAMEA114446194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080757 21649 ERR12080759 AMPLICON PRJEB66381 Saltmarsh 53.75872608N 7.71908464E 2019-07-15 salt marsh sediment 35591525 SAMEA114446196 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080759 21650 ERR12080760 AMPLICON PRJEB66381 Saltmarsh 53.75919508N 7.71899634E 2019-07-15 salt marsh sediment 44792071 SAMEA114446198 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080760 19442 ERR2508652 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 16824492 SAMEA1099945 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508652 19526 ERR2508737 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 14220988 SAMEA1100044 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508737 19529 ERR2508740 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 19386271 SAMEA1100047 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508740 19532 ERR2508744 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 10915615 SAMEA1100051 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508744 19537 ERR2508749 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 5525289 SAMEA1100056 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508749 19538 ERR2508750 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 19613878 SAMEA1100057 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508750 19554 ERR2508766 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 19110649 SAMEA1100073 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508766 19570 ERR2508782 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 10594082 SAMEA1100089 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508782 19577 ERR2508789 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 12595310 SAMEA1100096 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508789 19605 ERR2508817 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 15144466 SAMEA1100126 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508817 23309 SRR10723729 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Tanmen 2016-07-20 seagrass sediment 48230000 SAMN13567210 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723729 20609 SRR12125088 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 34319124 SAMN15415003 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125088 20549 SRR19745578 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 48915656 SAMN29155031 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745578 20534 SRR19745585 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 54329040 SAMN29155025 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745585 22040 SRR22025447 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.36911W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 75468584 SAMN31431884 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025447 22042 SRR22025449 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.36911W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 78319161 SAMN31431882 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025449 22093 SRR23933686 AMPLICON PRJNA925448 Saltmarsh 44.552025N 67.867171W USA: Milbridge\, Maine 2021-08-09 marsh sediment 62913150 SAMN33188434 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933686 24330 SRR24965703 AMPLICON PRJNA985394 Seagrass 37.21 N 122.62 E China:Shandong 2021-06 Zostera marina coastal sea water 24239530 SAMN35796548 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR24965703 16840 SRR28031520 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 40207200 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031520 16841 SRR28031521 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 40207200 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031521 16847 SRR28031527 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 51313500 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031527 16848 SRR28031528 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 51313500 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031528 16849 SRR28031529 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 28254900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031529 16850 SRR28031530 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 28254900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031530 16853 SRR28031533 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 91456800 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031533 21667 SRR5360893 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2015 Salt marsh sediment 132962904 SAMN06606345 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360893 21673 SRR5360899 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 140821227 SAMN06606339 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360899 21682 SRR5360910 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2015 Salt marsh sediment 149063150 SAMN06606328 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360910 21685 SRR5360913 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 150026186 SAMN06606325 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360913 21691 SRR5360920 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 131437922 SAMN06606318 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360920 21699 SRR5360929 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2015 Salt marsh sediment 126574189 SAMN06606309 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360929 21705 SRR5360935 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 183670634 SAMN06606303 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360935 22874 SRR5675639 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 46534873 SAMN07197239 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675639 22875 SRR5675640 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 78459421 SAMN07197240 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675640 22883 SRR5675648 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 29437321 SAMN07197253 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675648 22887 SRR5675652 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 36469507 SAMN07197247 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675652 22888 SRR5675653 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 46040011 SAMN07197246 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675653 22889 SRR5675654 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 33249039 SAMN07197249 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675654 21901 SRR6371073 AMPLICON PRJNA422172 Saltmarsh 37.77N 119.07E China 2017-10-04 Salt marsh soils 37130156 SAMN08166699 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371073 21054 SRR8931062 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:40:00Z soil 17615209 SAMN11465914 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931062 21055 SRR8931063 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:00:00Z soil 26218707 SAMN11465906 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931063 21060 SRR8931068 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:30:00Z soil 22364656 SAMN11465921 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931068 21062 SRR8931071 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:35:00Z soil 25454792 SAMN11465922 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931071 21063 SRR8931072 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:30:00Z soil 26807333 SAMN11465912 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931072 21064 SRR8931073 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:15:00Z soil 25237704 SAMN11465909 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931073 21065 SRR8931074 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:35:00Z soil 26319463 SAMN11465913 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931074 21066 SRR8931075 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:25:00Z soil 20661195 SAMN11465911 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931075 21068 SRR8931077 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:20:00Z soil 23912331 SAMN11465910 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931077