# Export date: 2026-06-15 15:11:31 # Microbe: Sinorhizobium (ID: 8098) # Total amplicons: 35 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 23213 SRR11244522 AMPLICON PRJNA574590 Seagrass 27.969433 N 35.200967 E Saudi Arabia 2016-02-20 Halophila stipulacea Rhizome 54452142 SAMN12860646 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11244522 16700 SRR11930137 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 1010770215 SAMN15143747 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930137 16701 SRR11930138 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 674363154 SAMN15143746 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930138 16702 SRR11930139 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 985302685 SAMN15143745 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930139 16704 SRR11930141 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 467847052 SAMN15143743 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930141 16699 SRR12070311 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2018/07/17 Mangrove soil sample 89306368 SAMN15317493 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070311 21246 SRR12852831 AMPLICON PRJNA670253 Saltmarsh 30.09861N 84.14806W USA: St. Marks\, FL 2018-06-19 sediment 5144470 SAMN16490789 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852831 23998 SRR19242028 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-04 seagrass seawater 39391000 SAMN28462898 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242028 24002 SRR19242032 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-04 seagrass seawater 36807000 SAMN28462894 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242032 24024 SRR19242054 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 49860000 SAMN28462874 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242054 18913 SRR19994902 AMPLICON PRJNA856080 Mangrove 0.242983 N 34.868767 E Kenya: Kakamega 2018/08/09 Mangrove Topsoil 38008160 SAMN29514606 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19994902 22044 SRR22025451 AMPLICON PRJNA893704 Saltmarsh 38.74663N 76.37007W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 78184478 SAMN31431880 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025451 22074 SRR22025485 AMPLICON PRJNA893704 Saltmarsh 38.77079N 76.37722W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 67410558 SAMN31431849 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025485 18038 SRR25728268 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 57369998 SAMN37055133 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728268 18068 SRR25728298 AMPLICON PRJNA1007244 Mangrove 20.243583S 106.574444 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 46903024 SAMN37055110 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728298 18096 SRR25728326 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 39119164 SAMN37055116 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728326 18097 SRR25728327 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 32725322 SAMN37055115 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728327 18108 SRR25728338 AMPLICON PRJNA1007244 Mangrove 20.243583S 106.574444 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 45281236 SAMN37055109 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728338 18116 SRR25728346 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 47643484 SAMN37055104 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728346 18117 SRR25728347 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 43433096 SAMN37055104 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728347 18127 SRR25728357 AMPLICON PRJNA1007244 Mangrove 20.243389S 106.574778 E Viet Nam: Nam Dinh 2025/08/19 Kandelia obovata estuarine mud 41619270 SAMN37055133 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728357 18129 SRR25728359 AMPLICON PRJNA1007244 Mangrove 20.245306S 106.573139 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 41232184 SAMN37055100 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728359 16848 SRR28031528 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 51313500 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031528 15836 SRR5814367 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 78130856 SAMN07338383 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814367 15858 SRR5814400 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 67587995 SAMN07338372 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814400 21893 SRR6371064 AMPLICON PRJNA422172 Saltmarsh 37.77N 119.08E China 2017-10-04 Salt marsh soils 33061840 SAMN08166684 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371064 21908 SRR6398154 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38373W USA 2013-07-07 Salt marsh sediment 9031955 SAMN08214118 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398154 21913 SRR6398159 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38377W USA 2013-07-07 Salt marsh sediment 5562211 SAMN08214121 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398159 21917 SRR6398163 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837603W USA 2013-07-07 Salt marsh sediment 2443043 SAMN08214135 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398163 21937 SRR6398185 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38376004W USA 2013-07-07 Salt marsh sediment 6797931 SAMN08214145 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398185 21022 SRR8268578 AMPLICON PRJNA507498 Saltmarsh 34.34N 119.37E China:Jiangsu coastal 2014-10-15 Lycium root 25531422 SAMN10496494 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR8268578 21056 SRR8931064 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:10:00Z soil 23228396 SAMN11465917 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931064 21060 SRR8931068 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:30:00Z soil 22364656 SAMN11465921 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931068 21062 SRR8931071 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:35:00Z soil 25454792 SAMN11465922 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931071 16755 SRR9894715 AMPLICON PRJNA558367 Mangrove 26.24049393 S 48.63721849 W Brazil: Santa Catarina 2025/12/15 Mangrove mangrove sediment 85868400 SAMN12444327 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9894715