# Export date: 2026-06-15 12:06:08 # Microbe: Roseibium_497070 Roseibium alexandrii (ID: 8133) # Total amplicons: 67 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22475 DRR403390 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass leaf 72676183 SAMD00532476 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403390 22559 ERR7421901 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 36995475 SAMEA11293278 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421901 22577 ERR7421919 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 21743834 SAMEA11293296 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421919 22617 ERR7421959 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 23577774 SAMEA11293336 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421959 23114 SRR10060503 AMPLICON PRJNA563200 Seagrass 32.17 S 115.73 E Australia: Cockburn Sound 2016-11 Posidonia australis sediment 49132800 SAMN12670154 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10060503 19701 SRR10092833 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 60044449 SAMN12716560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092833 19805 SRR10092937 AMPLICON PRJNA564581 Seaweed 44.04916667N 144.25777778E Japan 2016/09/14 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 41519967 SAMN12716392 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092937 20853 SRR11233103 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9957W USA: Harwich\, MA Muddy Creek Marsh 2016-10-12 sediment 7949486 SAMN13950542 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233103 23434 SRR11742122 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-06-30 seagrass sediment 29908385 SAMN14819972 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742122 23466 SRR11742154 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 33765573 SAMN14819943 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742154 23474 SRR11742162 AMPLICON PRJNA630066 Seagrass 29.86375 N 88.84147 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 36628707 SAMN14819882 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742162 20584 SRR12125058 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 64216084 SAMN15414961 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125058 20586 SRR12125061 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 37312879 SAMN15415000 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125061 20594 SRR12125070 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 31320638 SAMN15414974 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125070 23685 SRR12233907 AMPLICON PRJNA646607 Seagrass 37.35 N 122.57 E China:Rongcheng 2019-09-23 zostera marina seawater 44844786 SAMN15547886 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12233907 19221 SRR13741160 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/07 Seawater 30319115 SAMN16984765 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741160 19231 SRR13741170 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/07 Seawater 53624017 SAMN16984760 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741170 19395 SRR13741818 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/07 Laminaria setchellii algal material 135496719 SAMN16989002 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741818 14810 SRR15928127 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 109171740 SAMN21467041 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928127 14817 SRR15928134 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 74154127 SAMN21467035 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928134 14832 SRR15928149 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/08/21 coral coral 76474458 SAMN21467021 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928149 14851 SRR15928168 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 50807477 SAMN21467004 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928168 17800 SRR17658317 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 38552580 SAMN25078438 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658317 17815 SRR17658332 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 35000569 SAMN25078424 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658332 23978 SRR19242008 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-04 seagrass seawater 33420500 SAMN28462916 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242008 20521 SRR19745562 AMPLICON PRJNA850096 Seaweed China:Putian 2020/05/15 after seaweed culture estuarine water 51976392 SAMN29155046 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745562 20527 SRR19745572 AMPLICON PRJNA850096 Seaweed China:Putian 2020/05/15 after seaweed culture estuarine water 53475528 SAMN29155037 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745572 20529 SRR19745575 AMPLICON PRJNA850096 Seaweed China:Putian 2020/05/15 after seaweed culture estuarine water 49935576 SAMN29155034 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745575 20551 SRR19745583 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 50632440 SAMN29155027 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745583 24126 SRR23715712 AMPLICON PRJNA925291 Seagrass 33.102462 S 151.565207 E Australia: Johnys Point 2020-09-08 Zostera muelleri Estuarine sediment 94640452 SAMN33555418 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715712 17982 SRR23945121 AMPLICON PRJNA947804 Mangrove 12.975353S 45.160372 E Mayotte: Dapani 2025/11/18 marine biofilm Green biofilm on a dead wood 10570731 SAMN33866988 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945121 17989 SRR23945128 AMPLICON PRJNA947804 Mangrove 12.842133S 45.18656 E Mayotte: Dembeni 2025/11/18 marine biofilm Dark-green benthic biofilm 11395879 SAMN33866982 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945128 20412 SRR26913618 AMPLICON PRJNA1043828 Seaweed 34.0564S 151.157E Australia: New South Wales\, Sydney\, Cronulla 2021/04/14 Phyllospora comosa host associated 104840335 SAMN38354169 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26913618 20490 SRR27942806 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Ulva compressa host associated 15707762 SAMN39854497 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942806 20493 SRR27942809 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Ulva compressa host associated 18325650 SAMN39854494 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942809 20500 SRR27942816 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Padina sp. host associated 16268490 SAMN39854513 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942816 20508 SRR27942824 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Spyridia sp. host associated 16606576 SAMN39854506 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942824 22886 SRR5675651 AMPLICON PRJNA389390 Seagrass 54.330063 N 10.149543 E Germany:Baltic Sea 2016-02 Zostera marina seawater 66503722 SAMN07197244 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675651 16074 SRR5877317 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 83764288 SAMN06834398 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877317 16082 SRR5877325 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 13859525 SAMN06834390 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877325 16096 SRR5877339 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 41787064 SAMN06834456 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877339 16100 SRR5877343 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 63387110 SAMN06834452 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877343 16115 SRR5877358 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 44523725 SAMN06834407 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877358 16120 SRR5877363 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 127043707 SAMN06834402 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877363 16122 SRR5877365 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 91251692 SAMN06834400 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877365 16123 SRR5877366 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 43067164 SAMN06834470 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877366 16130 SRR5877373 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 101277374 SAMN06834436 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877373 16179 SRR5877422 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 96260010 SAMN06834472 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877422 16193 SRR5878968 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 14391899 SAMN06834666 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5878968 16194 SRR5878969 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 22981434 SAMN06834665 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5878969 16216 SRR5878991 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 51981515 SAMN06834678 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5878991 16222 SRR5878997 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 30274850 SAMN06834652 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5878997 16223 SRR5878998 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 52909263 SAMN06834653 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5878998 16265 SRR5879040 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 109947099 SAMN06834706 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5879040 16340 SRR5880102 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 63387110 SAMN06834452 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880102 16344 SRR5880106 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 41787064 SAMN06834456 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880106 16364 SRR5880126 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 96260010 SAMN06834472 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880126 16369 SRR5880131 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 83764288 SAMN06834398 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880131 16377 SRR5880139 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 13859525 SAMN06834390 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880139 16387 SRR5880149 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 43067164 SAMN06834470 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880149 16412 SRR5880174 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 44523725 SAMN06834407 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880174 16416 SRR5880178 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 127043707 SAMN06834402 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880178 16418 SRR5880180 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 91251692 SAMN06834400 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880180 16462 SRR5886383 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 120877916 SAMN06834625 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886383 17009 SRR6200810 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 17723095 SAMN07813376 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200810 17052 SRR6200853 AMPLICON PRJNA415044 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove sediment 52669238 SAMN07813293 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR6200853 23084 SRR8138171 AMPLICON PRJNA499131 Seagrass 34.006871 S 151.190176 E Australia: New South Wales\, Bonna Point 2016-11-18 Zostera muelleri leaf 140432054 SAMN10349785 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR8138171