# Export date: 2026-06-15 12:06:04 # Microbe: Methylobacterium Methylobacterium komagatae (ID: 8185) # Total amplicons: 29 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 16700 SRR11930137 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 1010770215 SAMN15143747 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930137 16702 SRR11930139 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 985302685 SAMN15143745 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930139 20914 SRR12852732 AMPLICON PRJNA670253 Saltmarsh 37.415258N 76.714539W USA: Gloucester Point\, VA 2018-06-29 sediment 5040979 SAMN16490903 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852732 15246 SRR14740933 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Fruit 58129200 SAMN19580886 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740933 15268 SRR14740955 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Fruit 43533000 SAMN19580884 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740955 15375 SRR14741062 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Fruit 29968800 SAMN19580967 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741062 24030 SRR19242060 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 46339000 SAMN28462869 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242060 24031 SRR19242061 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 54851500 SAMN28462868 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242061 24032 SRR19242062 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 55771000 SAMN28462867 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242062 24033 SRR19242063 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 50688000 SAMN28462866 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242063 24038 SRR19242068 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 49537000 SAMN28462861 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242068 24039 SRR19242069 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-11 seagrass seawater 55205500 SAMN28462860 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242069 24045 SRR19242075 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-11 seagrass seawater 39945500 SAMN28462855 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242075 24047 SRR19242077 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-11 seagrass seawater 54040000 SAMN28462853 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242077 24048 SRR19242078 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-11 seagrass seawater 54843500 SAMN28462852 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242078 24050 SRR19242080 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-11 seagrass seawater 47539000 SAMN28462850 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242080 24052 SRR19242082 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-11 seagrass seawater 43124500 SAMN28462849 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242082 24053 SRR19242083 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-11 seagrass seawater 47372500 SAMN28462848 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242083 24054 SRR19242084 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-11 seagrass seawater 49854000 SAMN28462847 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242084 24055 SRR19242085 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-11 seagrass seawater 53360000 SAMN28462846 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242085 17688 SRR24297411 AMPLICON PRJNA958136 Mangrove 16.27459 N 61.55722 W France: Guadeloupe 1905/07/12 Aratus pisonii and Minuca rapax Rhizophora mangle 2 19487859 SAMN34279708 PAIRED Illumina MiSeq GENOMIC 18S https://www.ncbi.nlm.nih.gov/sra/SRR24297411 18169 SRR25047282 AMPLICON PRJNA988256 Mangrove 1.2147 N 103.7586 E Singapore: Semakau 2021/08/25 plastic plastic 86849336 SAMN36011678 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047282 18254 SRR25047367 AMPLICON PRJNA988256 Mangrove 1.3166 N 103.9834 E Singapore: Tanah Merah 2021/07/13 plastic plastic 80739036 SAMN36011728 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047367 18326 SRR25047439 AMPLICON PRJNA988256 Mangrove 1.1607 N 103.7407 E Singapore: Raffles Lighthouse 2021/09/07 plastic plastic 59779202 SAMN36011631 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047439 15856 SRR5814398 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 49235033 SAMN07338370 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814398 16626 SRR9593090 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 83283018 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593090