# Export date: 2026-06-15 12:06:54 # Microbe: Rhodopseudomonas Rhodopseudomonas harwoodiae (ID: 8225) # Total amplicons: 17 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20626 SRR12228836 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 206085000 SAMN10953557 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228836 20633 SRR12228845 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 32079000 SAMN10953566 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228845 20634 SRR12228846 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 63238500 SAMN10953565 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228846 20966 SRR12852833 AMPLICON PRJNA670253 Saltmarsh 30.09861N 84.14806W USA: St. Marks\, FL 2018-06-19 sediment 5404436 SAMN16490787 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852833 20771 SRR13380137 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-06 Salt marsh sediment 48154905 SAMN17251822 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380137 18000 SRR25619872 AMPLICON PRJNA1004744 Mangrove 22.528332S 114.003056 E China: Shenzhen 2025/02/18 Mangrove mangrove sediment 18747715 SAMN36953847 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619872 18003 SRR25619876 AMPLICON PRJNA1004744 Mangrove 19.977222S 110.5594440 E China: Hainan 2025/02/18 Mangrove mangrove sediment 18612211 SAMN36953843 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619876 18006 SRR25619879 AMPLICON PRJNA1004744 Mangrove 21.153056S 110.4386112 E China: Zhanjiang 2025/02/18 Mangrove mangrove sediment 18749480 SAMN36953861 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619879 18008 SRR25619881 AMPLICON PRJNA1004744 Mangrove 21.153056S 110.4386111 E China: Zhanjiang 2025/02/18 Mangrove mangrove sediment 18731149 SAMN36953859 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619881 18011 SRR25619884 AMPLICON PRJNA1004744 Mangrove 21.153056S 110.438611 E China: Zhanjiang 2025/02/18 Mangrove mangrove sediment 18631583 SAMN36953857 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619884 18013 SRR25619886 AMPLICON PRJNA1004744 Mangrove 23.919167S 117.420279 E China: Yunxiao 2025/02/18 Mangrove mangrove sediment 18557888 SAMN36953855 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619886 18015 SRR25619888 AMPLICON PRJNA1004744 Mangrove 23.919166S 117.420278 E China: Yunxiao 2025/02/18 Mangrove mangrove sediment 18648322 SAMN36953853 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619888 18017 SRR25619890 AMPLICON PRJNA1004744 Mangrove 23.9191671S 117.420278 E China: Yunxiao 2025/02/18 Mangrove mangrove sediment 18528908 SAMN36953851 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619890 18019 SRR25619892 AMPLICON PRJNA1004744 Mangrove 22.5283333S 114.003056 E China: Shenzhen 2025/02/18 Mangrove mangrove sediment 18686061 SAMN36953849 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619892 18021 SRR25619894 AMPLICON PRJNA1004744 Mangrove 19.9772222S 110.5594444 E China: Hainan 2025/02/18 Mangrove mangrove sediment 18516905 SAMN36953839 SINGLE Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25619894 22250 SRR27176434 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 39787594 SAMN38763959 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176434 22292 SRR28820943 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-05 salt marsh soil 133644602 SAMN41100902 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820943