# Export date: 2026-06-15 08:48:44 # Microbe: Rhodovulum Rhodovulum iodosum (ID: 8312) # Total amplicons: 40 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 23996 SRR19242026 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-08 seagrass seawater 34484000 SAMN28462837 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242026 24007 SRR19242037 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-08 seagrass seawater 46814000 SAMN28462836 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242037 24018 SRR19242048 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-08 seagrass seawater 43370500 SAMN28462835 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242048 24031 SRR19242061 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 54851500 SAMN28462868 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242061 24032 SRR19242062 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 55771000 SAMN28462867 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242062 24038 SRR19242068 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 49537000 SAMN28462861 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242068 24045 SRR19242075 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-11 seagrass seawater 39945500 SAMN28462855 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242075 24053 SRR19242083 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-11 seagrass seawater 47372500 SAMN28462848 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242083 24057 SRR19242087 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 37160500 SAMN28462844 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242087 24059 SRR19242089 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-08 seagrass seawater 36032000 SAMN28462842 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242089 24062 SRR19242092 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-08 seagrass seawater 39808000 SAMN28462831 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242092 24063 SRR19242093 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-08 seagrass seawater 33209500 SAMN28462830 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242093 16892 SRR19251794 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 45847012 SAMN26511789 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251794 16893 SRR19251795 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 57167245 SAMN26511788 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251795 20517 SRR19745558 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 50917284 SAMN29155015 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745558 20531 SRR19745580 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 54750184 SAMN29155029 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745580 20533 SRR19745582 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 53224996 SAMN29155010 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745582 20551 SRR19745583 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 50632440 SAMN29155027 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745583 20552 SRR19745584 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 55583200 SAMN29155026 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745584 20534 SRR19745585 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 54329040 SAMN29155025 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745585 20536 SRR19745587 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 54070888 SAMN29155023 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745587 20537 SRR19745588 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 54039656 SAMN29155022 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745588 20538 SRR19745589 AMPLICON PRJNA850096 Seaweed China:Putian 2020/01/08 after seaweed culture estuarine water 48831232 SAMN29155021 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745589 20541 SRR19745594 AMPLICON PRJNA850096 Seaweed China:Putian 2019/12/10 after seaweed culture estuarine water 51860116 SAMN29155008 PAIRED Illumina HiSeq 4000 METAGENOMIC 16s/18s https://www.ncbi.nlm.nih.gov/sra/SRR19745594 24091 SRR21686197 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass root_soil 64866292 SAMN30916014 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686197 24092 SRR21686198 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass root_soil 84500866 SAMN30916013 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686198 24093 SRR21686199 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass surrounding_water 71742928 SAMN30916025 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686199 24095 SRR21686201 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass surrounding_water 61455130 SAMN30916023 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686201 24099 SRR21686205 AMPLICON PRJNA881797 Seagrass NA China: Binzhou 2022-07-30 Seagrass root_soil 64035838 SAMN30916011 PAIRED Illumina NovaSeq 6000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR21686205 22709 SRR26898568 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass leaf 41619000 SAMN38338616 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898568 17791 SRR4858370 AMPLICON PRJNA351850 Mangrove 21.74 N 88.14 E India: West Bengal'' 2014/07/25 bacterioplankton Chemaguri creek in Sundarbans mangrove ecoregion 557254391 SAMN05954868 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858370 21691 SRR5360920 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 131437922 SAMN06606318 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360920 16114 SRR5877357 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 66461630 SAMN06834428 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877357 16218 SRR5878993 AMPLICON PRJNA339628 Mangrove 16.20 N 41.24 E Saudi Arabia: Farasan 2025/03/15 Mangrove Sediment 31147930 SAMN06834676 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5878993 16323 SRR5880085 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 66461630 SAMN06834428 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880085 21895 SRR6371066 AMPLICON PRJNA422172 Saltmarsh 37.78N 119.1E China 2017-10-04 Salt marsh soils 34037682 SAMN08166689 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371066 21900 SRR6371072 AMPLICON PRJNA422172 Saltmarsh 37.78N 119.11E China 2017-10-04 Salt marsh soils 29879066 SAMN08166691 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371072 17378 SRR7585505 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 72004224 SAMN09700192 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585505 17526 SRR7585653 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 57167245 SAMN09700168 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585653 17528 SRR7585655 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 45847012 SAMN09700170 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585655