# Export date: 2026-06-12 19:24:29 # Microbe: Roseicyclus Roseicyclus mahoneyensis (ID: 8316) # Total amplicons: 40 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22541 ERR3890616 AMPLICON PRJEB36104 Seagrass 38.34036 N 142.051469 E 2016-07-07 Zostera muelleri leaf 63160200 SAMEA6528927 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR3890616 23214 SRR11244523 AMPLICON PRJNA574590 Seagrass 19.960217 N 40.15495 E Saudi Arabia 2016-02-26 Halodule uninervis leaf 145175974 SAMN12860645 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11244523 23438 SRR11742126 AMPLICON PRJNA630066 Seagrass 29.86375 N 88.84147 W USA: Chandeleur Islands\, Lousiana 2015-07-01 seagrass sediment 29150288 SAMN14819968 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742126 23439 SRR11742127 AMPLICON PRJNA630066 Seagrass 29.86375 N 88.84147 W USA: Chandeleur Islands\, Lousiana 2015-06-30 seagrass sediment 28080004 SAMN14819967 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742127 23445 SRR11742133 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-07-01 seagrass sediment 31211894 SAMN14819962 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742133 23449 SRR11742137 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-07-02 seagrass sediment 25119121 SAMN14819958 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742137 23458 SRR11742146 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-22 seagrass sediment 25831834 SAMN14819950 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742146 23466 SRR11742154 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 33765573 SAMN14819943 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742154 23488 SRR11742176 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 22089902 SAMN14819923 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742176 23491 SRR11742179 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 27439114 SAMN14819920 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742179 23496 SRR11742184 AMPLICON PRJNA630066 Seagrass 29.86375 N 88.84147 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 20979268 SAMN14819880 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742184 23506 SRR11742194 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 64536880 SAMN14819906 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742194 23507 SRR11742195 AMPLICON PRJNA630066 Seagrass 29.86375 N 88.84147 W USA: Chandeleur Islands\, Lousiana 2015-09-23 seagrass sediment 24794544 SAMN14819879 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742195 23660 SRR12086847 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 367184384 SAMN15364569 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086847 23661 SRR12086848 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 575337245 SAMN15364568 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086848 23902 SRR18298423 AMPLICON PRJNA774145 Seagrass 19.56282 N 85.18651 E India 2018-04-14 seagrass sediment 12959081 SAMN22568825 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298423 16927 SRR19251829 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 46911924 SAMN26511792 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251829 22042 SRR22025449 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.36911W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 78319161 SAMN31431882 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025449 22048 SRR22025457 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 68284997 SAMN31431830 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025457 22058 SRR22025468 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 66709287 SAMN31431829 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025468 22070 SRR22025481 AMPLICON PRJNA893704 Saltmarsh 38.7613N 76.38105W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 55304704 SAMN31431853 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025481 22079 SRR22025490 AMPLICON PRJNA893704 Saltmarsh 38.76607N 76.381W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 66201810 SAMN31431827 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025490 22081 SRR22025492 AMPLICON PRJNA893704 Saltmarsh 38.77305N 76.37802W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 66954228 SAMN31431843 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025492 22107 SRR23933937 AMPLICON PRJNA925448 Saltmarsh 41.2611N 72.5491W USA: Madison\, Connecticut marsh sediment 133105300 SAMN33188282 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933937 24333 SRR24965706 AMPLICON PRJNA985394 Seagrass 37.04 N 122.57 E China:Shandong 2021-06 Zostera marina coastal sea water 23904216 SAMN35796545 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR24965706 16931 SRR25258300 AMPLICON PRJNA994497 Mangrove 16.20 N 61.27 W Guadeloupe 2018/07/19 Mangrove coastal sea water 10488177 SAMN36430096 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR25258300 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 22702 SRR26898561 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass coastal seawater 40218500 SAMN38338631 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898561 17550 SRR7585677 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 46911924 SAMN09700177 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585677 22726 SRR7907410 AMPLICON PRJNA342246 Seagrass 33.158162 S 151.531905 E Australia: New South Wales\, Lake Macquarie 2015-10-24 Zostera muelleri Seawater 56196362 SAMN10135424 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7907410 22728 SRR7907412 AMPLICON PRJNA342246 Seagrass 33.158162 S 151.531905 E Australia: New South Wales\, Lake Macquarie 2015-10-24 Zostera muelleri Seawater 43777594 SAMN10135422 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7907412 22736 SRR7907420 AMPLICON PRJNA342246 Seagrass 33.87225 S 151.262139 E Australia: New South Wales\, Rose Bay 2015-11-14 Zostera muelleri Seawater 46074777 SAMN10135440 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7907420 22737 SRR7907421 AMPLICON PRJNA342246 Seagrass 33.87225 S 151.262139 E Australia: New South Wales\, Rose Bay 2015-11-14 Zostera muelleri Seawater 32573626 SAMN10135441 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7907421 22738 SRR7907422 AMPLICON PRJNA342246 Seagrass 33.87225 S 151.262139 E Australia: New South Wales\, Rose Bay 2015-11-14 Zostera muelleri Seawater 51280963 SAMN10135442 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7907422