# Export date: 2026-06-14 18:15:40 # Microbe: Roseobacter Roseobacter denitrificans (ID: 8328) # Total amplicons: 16 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21659 ERR12080772 AMPLICON PRJEB66381 Saltmarsh 53.75976583N 7.71516E 2019-07-15 salt marsh sediment 40578778 SAMEA114446210 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080772 19678 SRR10092810 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 10756105 SAMN12716529 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092810 19696 SRR10092828 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 77775584 SAMN12716564 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092828 19700 SRR10092832 AMPLICON PRJNA564581 Seaweed 38.17976N 122.908576W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 52782253 SAMN12716561 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092832 19793 SRR10092925 AMPLICON PRJNA564581 Seaweed 44.04916667N 144.25777778E Japan 2016/09/14 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 12318372 SAMN12716413 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092925 19804 SRR10092936 AMPLICON PRJNA564581 Seaweed 44.04916667N 144.25777778E Japan 2016/09/14 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 18353298 SAMN12716393 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092936 19813 SRR10092945 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 62756019 SAMN12716471 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092945 21191 SRR11233224 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9951W USA: Harwich\, MA Muddy Creek Marsh 2017-06 sediment 25900207 SAMN13950554 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233224 20618 SRR12228803 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 36028000 SAMN10953560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228803 20622 SRR12228831 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus bulk soil 81997000 SAMN10953579 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228831 20628 SRR12228838 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 47792000 SAMN10953573 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228838 17800 SRR17658317 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 38552580 SAMN25078438 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658317 17837 SRR17658354 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 42991477 SAMN25078404 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658354 17852 SRR17658369 AMPLICON PRJNA798089 Mangrove 33.8568146S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 37061045 SAMN25078391 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658369 21687 SRR5360915 AMPLICON PRJNA379357 Saltmarsh 53.76191N 7.72333E Germany: Spiekeroog 2015 Salt marsh sediment 144342196 SAMN06606323 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360915 21693 SRR5360922 AMPLICON PRJNA379357 Saltmarsh 53.76202N 7.7222E Germany: Spiekeroog 2015 Salt marsh sediment 171767727 SAMN06606316 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360922