# Export date: 2026-06-15 20:21:37 # Microbe: Roseovarius_489616 Roseovarius nanhaiticus (ID: 8352) # Total amplicons: 54 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21638 ERR12080744 AMPLICON PRJEB66381 Saltmarsh 53.75970051N 7.71765833E 2019-07-15 salt marsh sediment 28040460 SAMEA114446181 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080744 21612 ERR12080746 AMPLICON PRJEB66381 Saltmarsh 53.75981508N 7.71560755E 2019-07-15 salt marsh sediment 24259792 SAMEA114446183 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080746 21640 ERR12080747 AMPLICON PRJEB66381 Saltmarsh 53.75842165N 7.72091556E 2019-07-15 salt marsh sediment 36238259 SAMEA114446184 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080747 21641 ERR12080748 AMPLICON PRJEB66381 Saltmarsh 53.75874119N 7.71911983E 2019-07-15 salt marsh sediment 28738449 SAMEA114446185 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080748 21642 ERR12080749 AMPLICON PRJEB66381 Saltmarsh 53.75920507N 7.71902046E 2019-07-15 salt marsh sediment 39430492 SAMEA114446186 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080749 21643 ERR12080750 AMPLICON PRJEB66381 Saltmarsh 53.75971551N 7.71768791E 2019-07-15 salt marsh sediment 36165461 SAMEA114446187 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080750 21644 ERR12080751 AMPLICON PRJEB66381 Saltmarsh 53.75957867N 7.71678221E 2019-07-15 salt marsh sediment 50991346 SAMEA114446188 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080751 21645 ERR12080752 AMPLICON PRJEB66381 Saltmarsh 53.75984101N 7.71565287E 2019-07-15 salt marsh sediment 30858945 SAMEA114446189 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080752 21646 ERR12080753 AMPLICON PRJEB66381 Saltmarsh 53.75843454N 7.72094172E 2019-07-15 salt marsh sediment 36752666 SAMEA114446190 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080753 21648 ERR12080755 AMPLICON PRJEB66381 Saltmarsh 53.75968597N 7.71762858E 2019-07-15 salt marsh sediment 23685296 SAMEA114446192 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080755 21615 ERR12080758 AMPLICON PRJEB66381 Saltmarsh 53.75840802N 7.7208867E 2019-07-15 salt marsh sediment 42918048 SAMEA114446195 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080758 21650 ERR12080760 AMPLICON PRJEB66381 Saltmarsh 53.75919508N 7.71899634E 2019-07-15 salt marsh sediment 44792071 SAMEA114446198 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080760 19832 SRR10092964 AMPLICON PRJNA564581 Seaweed 54.48583333N 8.8125E Germany 2017/09/20 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 51768113 SAMN12716494 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092964 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 20615 SRR12228797 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 78202500 SAMN10953564 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228797 20623 SRR12228832 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 110630000 SAMN10953578 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228832 20624 SRR12228834 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 554476500 SAMN10953576 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228834 20626 SRR12228836 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 206085000 SAMN10953557 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228836 20629 SRR12228839 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 59373500 SAMN10953572 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228839 20630 SRR12228840 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 96120000 SAMN10953571 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228840 20632 SRR12228844 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 175354000 SAMN10953567 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228844 22102 SRR23933819 AMPLICON PRJNA925448 Saltmarsh 43.2926N 70.5725W USA: Wells\, Maine 2021-06-25 marsh sediment 42478738 SAMN33188475 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933819 20032 SRR4105465 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 48452036 SAMN05521713 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105465 21662 SRR5360887 AMPLICON PRJNA379357 Saltmarsh 53.76226N 7.72227E Germany: Spiekeroog 2015 Salt marsh sediment 166936558 SAMN06606351 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360887 21664 SRR5360889 AMPLICON PRJNA379357 Saltmarsh 53.76266N 7.7225E Germany: Spiekeroog 2015 Salt marsh sediment 149046571 SAMN06606349 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360889 21667 SRR5360893 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2015 Salt marsh sediment 132962904 SAMN06606345 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360893 21668 SRR5360894 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2015 Salt marsh sediment 119446479 SAMN06606344 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360894 21669 SRR5360895 AMPLICON PRJNA379357 Saltmarsh 53.76195N 7.72287E Germany: Spiekeroog 2015 Salt marsh sediment 129635220 SAMN06606343 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360895 21670 SRR5360896 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72346E Germany: Spiekeroog 2015 Salt marsh sediment 105858161 SAMN06606342 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360896 21673 SRR5360899 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 140821227 SAMN06606339 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360899 21674 SRR5360900 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2015 Salt marsh sediment 108587699 SAMN06606338 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360900 21675 SRR5360901 AMPLICON PRJNA379357 Saltmarsh 53.76191N 7.72333E Germany: Spiekeroog 2015 Salt marsh sediment 115480604 SAMN06606337 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360901 21679 SRR5360905 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 117325839 SAMN06606333 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360905 21684 SRR5360912 AMPLICON PRJNA379357 Saltmarsh 53.76195N 7.72287E Germany: Spiekeroog 2015 Salt marsh sediment 114411596 SAMN06606326 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360912 21686 SRR5360914 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2015 Salt marsh sediment 115035163 SAMN06606324 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360914 21687 SRR5360915 AMPLICON PRJNA379357 Saltmarsh 53.76191N 7.72333E Germany: Spiekeroog 2015 Salt marsh sediment 144342196 SAMN06606323 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360915 21690 SRR5360919 AMPLICON PRJNA379357 Saltmarsh 53.76201N 7.72231E Germany: Spiekeroog 2015 Salt marsh sediment 141673037 SAMN06606319 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360919 21691 SRR5360920 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 131437922 SAMN06606318 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360920 21695 SRR5360925 AMPLICON PRJNA379357 Saltmarsh 53.76201N 7.72231E Germany: Spiekeroog 2015 Salt marsh sediment 110789471 SAMN06606313 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360925 21697 SRR5360927 AMPLICON PRJNA379357 Saltmarsh 53.76219N 7.72282E Germany: Spiekeroog 2015 Salt marsh sediment 123435308 SAMN06606311 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360927 21704 SRR5360934 AMPLICON PRJNA379357 Saltmarsh 53.76192N 7.72321E Germany: Spiekeroog 2015 Salt marsh sediment 151419638 SAMN06606304 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360934 21713 SRR5360943 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2014 Salt marsh sediment 89615105 SAMN06606295 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360943 21714 SRR5360944 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2014 Salt marsh sediment 47497837 SAMN06606294 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360944 21716 SRR5360946 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72346E Germany: Spiekeroog 2014 Salt marsh sediment 35939162 SAMN06606292 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360946 21718 SRR5360949 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2014 Salt marsh sediment 97142823 SAMN06606289 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360949 21719 SRR5360950 AMPLICON PRJNA379357 Saltmarsh 53.76205N 7.7234E Germany: Spiekeroog 2014 Salt marsh sediment 69872797 SAMN06606288 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360950 21720 SRR5360951 AMPLICON PRJNA379357 Saltmarsh 53.76191N 7.72333E Germany: Spiekeroog 2014 Salt marsh sediment 50467575 SAMN06606287 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360951 21721 SRR5360952 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2014 Salt marsh sediment 74715789 SAMN06606286 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360952 21724 SRR5360955 AMPLICON PRJNA379357 Saltmarsh 53.76266N 7.7225E Germany: Spiekeroog 2014 Salt marsh sediment 89447558 SAMN06606283 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360955 21944 SRR6398194 AMPLICON PRJNA423244 Saltmarsh 41.35173N 70.38376W USA 2013-07-07 Salt marsh sediment 16591133 SAMN08214111 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398194 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789