# Export date: 2026-06-14 17:48:54 # Microbe: Kordiimonas_483017 Kordiimonas sediminis (ID: 8476) # Total amplicons: 69 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 15038 SRR10392991 AMPLICON PRJNA578400 Mangrove 18.3185583 N 64.7242358 W Virgin Islands: Southern Shore of St. John 2017/07/23 Seawater Northeastern Caribbean Seawater 42232256 SAMN13071685 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR10392991 15040 SRR10392993 AMPLICON PRJNA578400 Mangrove 18.3177881 N 64.7232301 W Virgin Islands: Southern Shore of St. John 2017/07/23 Seawater Northeastern Caribbean Seawater 36719794 SAMN13071683 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR10392993 21365 SRR11232930 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9955W USA: Harwich\, MA Muddy Creek Marsh 2017-10-23 sediment 17065849 SAMN13950597 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232930 21170 SRR11233120 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2017-07 sediment 17193832 SAMN13950526 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233120 23184 SRR11244493 AMPLICON PRJNA574590 Seagrass 19.270667 N 40.898117 E Saudi Arabia 2016-02-28 Thalassia hemprichii Bare sediment 116462629 SAMN12860731 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11244493 23373 SRR11489874 AMPLICON PRJNA623164 Seagrass 30.0472 N 84.1666 W USA: Florida\, Apalachee Bay 2016-07-22 Thalassia testudinum blade surface 13102593 SAMN14540251 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11489874 23375 SRR11489876 AMPLICON PRJNA623164 Seagrass 30.0472 N 84.1666 W USA: Florida\, Apalachee Bay 2016-07-22 Thalassia testudinum blade surface 9927518 SAMN14540249 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11489876 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 23658 SRR12086845 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 304752972 SAMN15364579 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086845 20913 SRR12852730 AMPLICON PRJNA670253 Saltmarsh 30.05833N 89.79194W USA: New Orleans\, LA 2018-06-15 sediment 45901623 SAMN16490724 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852730 21245 SRR12852828 AMPLICON PRJNA670253 Saltmarsh 30.107309N 84.260337W USA: St. Marks\, FL 2018-06-19 sediment 6229306 SAMN16490792 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852828 15273 SRR14740960 AMPLICON PRJNA735404 Mangrove 1.211727 N 103.758781 E Malaysia: Semakau 2017/03/07 Sonneratia alba and Avicennia alba Sediment 132448200 SAMN19581060 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740960 15410 SRR14741098 AMPLICON PRJNA735404 Mangrove 2.781230 N 104.206822 E Malaysia: Tioman 2017/03/07 Sonneratia alba and Avicennia alba Sediment 67765800 SAMN19581394 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741098 23738 SRR15068648 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Zostera marina sediment 448116339 SAMN20115036 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068648 14824 SRR15928141 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 51951933 SAMN21467028 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928141 17810 SRR17658327 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 33897761 SAMN25078429 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658327 17854 SRR17658371 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 36608224 SAMN25078452 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658371 18894 SRR18349719 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/11/16 Mangrove mangrove sediments 131152245 SAMN26747220 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349719 18903 SRR19994844 AMPLICON PRJNA856080 Mangrove 4.428983 S 39.512317 E Kenya: Gazi Bay 2018/09/19 Mangrove Water\, Mud\, Brine 37697014 SAMN29514580 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19994844 24236 SRR23829691 AMPLICON PRJNA944167 Seagrass 1.74401 N 128.03611 E Indonesia: Halmahera 2010-06 Syringodium isoetifolium plant 36953770 SAMN33739285 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829691 24268 SRR23829723 AMPLICON PRJNA944167 Seagrass 5.33832 S 123.53486 E Indonesia: Wakatobi 2011-08 Syringodium isoetifolium plant 44676828 SAMN33739375 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829723 17986 SRR23945125 AMPLICON PRJNA947804 Mangrove 12.785427S 45.096342 E Mayotte: Zidakani 2025/11/18 marine biofilm Green benthic biofilm 11303890 SAMN33866984 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945125 17990 SRR23945129 AMPLICON PRJNA947804 Mangrove 12.842133S 45.18656 E Mayotte: Dembeni 2025/11/18 marine biofilm Biofilm on a pneumatophore 11878851 SAMN33866981 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945129 18184 SRR25047297 AMPLICON PRJNA988256 Mangrove 1.2130 N 103.7569 E Singapore: Semakau 2021/09/07 sediment sediment 69329330 SAMN36011664 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047297 18196 SRR25047309 AMPLICON PRJNA988256 Mangrove 1.2257 N 103.7464 E Singapore: Pulau Hantu Besar 2021/09/14 sediment sediment 58504768 SAMN36011588 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047309 18204 SRR25047317 AMPLICON PRJNA988256 Mangrove 1.2263 N 103.7478 E Singapore: Pulau Hantu Besar 2021/07/29 seawater seawater 58199554 SAMN36011581 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047317 18205 SRR25047318 AMPLICON PRJNA988256 Mangrove 1.2263 N 103.7478 E Singapore: Pulau Hantu Besar 2021/07/29 seawater seawater 58782290 SAMN36011580 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047318 18229 SRR25047342 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 plastic plastic 91941052 SAMN36011525 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047342 18248 SRR25047361 AMPLICON PRJNA988256 Mangrove 1.3166 N 103.9834 E Singapore: Tanah Merah 2021/07/13 seawater seawater 55111896 SAMN36011733 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047361 18251 SRR25047364 AMPLICON PRJNA988256 Mangrove 1.3166 N 103.9834 E Singapore: Tanah Merah 2021/07/13 sediment sediment 65948498 SAMN36011731 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047364 18270 SRR25047383 AMPLICON PRJNA988256 Mangrove 1.2160 N 103.8314 E Singapore: Small Sister's Island 2021/09/09 plastic plastic 40236476 SAMN36011713 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047383 18283 SRR25047396 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 plastic plastic 51343376 SAMN36011513 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047396 18305 SRR25047418 AMPLICON PRJNA988256 Mangrove 1.4450 N 103.7335 E Singapore: Sungei Buloh Wetland Reserve 2021/07/27 plastic plastic 85012634 SAMN36011650 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047418 18322 SRR25047435 AMPLICON PRJNA988256 Mangrove 1.1607 N 103.7407 E Singapore: Raffles Lighthouse 2021/09/07 sediment sediment 75955544 SAMN36011634 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047435 18323 SRR25047436 AMPLICON PRJNA988256 Mangrove 1.1607 N 103.7407 E Singapore: Raffles Lighthouse 2021/09/07 sediment sediment 69805512 SAMN36011633 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047436 18337 SRR25047450 AMPLICON PRJNA988256 Mangrove 1.4101 N 103.9907 E Singapore: Pulau Ubin Chek Jawa 2021/07/15 plastic plastic 54453910 SAMN36011621 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047450 18358 SRR25047471 AMPLICON PRJNA988256 Mangrove 1.2198 N 103.8506 E Singapore: Bendera Bay 2021/08/11 seawater seawater 54699526 SAMN36011503 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047471 24360 SRR25047729 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 35112252 SAMN36015152 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047729 24376 SRR25047759 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere bulk sediment 63766248 SAMN36015172 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047759 24378 SRR25047761 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere bulk sediment 59384290 SAMN36015173 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047761 16933 SRR25258302 AMPLICON PRJNA994497 Mangrove 16.16 N 61.33 W Guadeloupe 2018/07/17 Mangrove coastal sea water 9510830 SAMN36430094 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR25258302 18421 SRR27644514 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 19437324 SAMN39505287 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644514 18445 SRR27644538 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 15060136 SAMN39505455 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644538 18483 SRR27644576 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 20013540 SAMN39505230 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644576 18488 SRR27644581 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 20672504 SAMN39505474 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644581 18501 SRR27644594 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 20787264 SAMN39505376 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644594 18525 SRR27644618 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 19426452 SAMN39505279 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644618 18528 SRR27644621 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 13085660 SAMN39505277 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644621 18555 SRR27644648 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 13483696 SAMN39505442 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644648 18605 SRR27644698 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 18573000 SAMN39505339 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644698 18637 SRR27644730 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 17580628 SAMN39505398 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644730 18650 SRR27644743 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/22 Mangrove soil 16393466 SAMN39505328 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644743 22348 SRR28821035 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-14 salt marsh soil 232016218 SAMN41100806 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821035 22801 SRR5675566 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 8392860 SAMN07197209 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675566 22803 SRR5675568 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 5407483 SAMN07197211 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675568 22809 SRR5675574 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10623320 SAMN07197213 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675574 22810 SRR5675575 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 11522743 SAMN07197212 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675575 22854 SRR5675619 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 36711782 SAMN07197189 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675619 22859 SRR5675624 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20173631 SAMN07197186 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675624 17568 SRR5814365 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 81066141 SAMN07338381 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5814365 15855 SRR5814396 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 69004437 SAMN07338376 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814396 16141 SRR5877384 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 61811394 SAMN06834415 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5877384 16399 SRR5880161 AMPLICON PRJNA339628 Mangrove 31.42 S 29.25 E South Africa: Mngazana 2025/04/16 Mangrove Sediment 61811394 SAMN06834415 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5880161 21774 SRR7877461 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 57151472 SAMN10092200 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877461 21817 SRR7877507 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 47486309 SAMN10092184 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877507 21829 SRR7877519 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 41250564 SAMN10092126 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877519 21840 SRR7877532 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 59157820 SAMN10092190 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877532 21875 SRR7877574 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-07-18 Salt marsh sediment 42202129 SAMN10092090 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877574 15126 SRR9213686 AMPLICON PRJNA543557 Mangrove 9.58 N 79.17 E India:Puthuvype Mangrove 2017/10/01 Puthuvype and Mangalavanam Sediment samples are collected from Puthuvype mangrove region 150242400 SAMN11772331 PAIRED Illumina HiSeq 4000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9213686