# Export date: 2026-06-15 18:21:51 # Microbe: Parasphingorhabdus (ID: 8573) # Total amplicons: 43 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 20153 ERR2318980 AMPLICON PRJEB25010 Seaweed 51.6618N 128.1593W 2015/03/19 Hildenbrandia_sp._23GWS host associated 57397653 SAMEA104603393 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2318980 23328 SRR11249258 AMPLICON PRJNA610593 Seagrass 39.313109 N 2.98877 E Spain 2019-02 Posidonia oceanica root 6382569697 SAMN14306704 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11249258 19911 SRR12033723 AMPLICON PRJNA639819 Seaweed 43.5N 6.5E France: Carqueiranne 2017/07/01 Rocky_surface Seawater 43388000 SAMN15250141 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033723 19920 SRR12033732 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/05/01 Rocky_surface Seawater 45954000 SAMN15250132 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033732 19927 SRR12033739 AMPLICON PRJNA639819 Seaweed 43.5N 6.5E France: Carqueiranne 2017/05/01 Rocky_surface Seawater 38681000 SAMN15250126 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033739 19930 SRR12033742 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/05/01 Rocky_surface Seawater 27947000 SAMN15250123 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033742 19932 SRR12033744 AMPLICON PRJNA639819 Seaweed 43.5N 6.5E France: Carqueiranne 2017/02/01 Water Seawater 33060500 SAMN15250095 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033744 19937 SRR12033749 AMPLICON PRJNA639819 Seaweed 43.5N 5.54E France: La Seyne 2017/04/01 Rocky_surface Seawater 26359000 SAMN15250117 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033749 19944 SRR12033756 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/03/01 Rocky_surface Seawater 32750500 SAMN15250111 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033756 19948 SRR12033760 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/03/01 Taonia atomaria Seawater 11035828 SAMN15250172 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033760 19949 SRR12033761 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/02/01 Rocky_surface Seawater 38421000 SAMN15250100 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033761 19971 SRR12033783 AMPLICON PRJNA639819 Seaweed 43N 6.11E France: Porquerolles island north 2017/02/01 Rocky_surface Seawater 32893500 SAMN15250098 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033783 19980 SRR12033792 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/07/01 Rocky_surface Seawater 30853000 SAMN15250143 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033792 20004 SRR12033816 AMPLICON PRJNA639819 Seaweed 43.5N 6.5E France: Carqueiranne 2017/06/01 Taonia atomaria Seawater 11130043 SAMN15250206 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033816 20012 SRR12033824 AMPLICON PRJNA639819 Seaweed 43N 6.11E France: Porquerolles island north 2017/05/01 Taonia atomaria Seawater 11909516 SAMN15250199 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033824 20020 SRR12033832 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/03/01 Rocky_surface Seawater 19240000 SAMN15250102 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033832 20022 SRR12033834 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/02/01 Rocky_surface Seawater 18499000 SAMN15250092 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033834 17800 SRR17658317 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 38552580 SAMN25078438 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658317 17806 SRR17658323 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 31561764 SAMN25078433 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658323 17810 SRR17658327 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 33897761 SAMN25078429 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658327 17814 SRR17658331 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 34734939 SAMN25078425 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658331 17816 SRR17658333 AMPLICON PRJNA798089 Mangrove 33.8568146S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 35507743 SAMN25078388 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658333 17826 SRR17658343 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 46331623 SAMN25078414 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658343 17831 SRR17658348 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 38058634 SAMN25078410 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658348 17846 SRR17658363 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 41518893 SAMN25078396 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658363 23988 SRR19242018 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-04 seagrass seawater 36404500 SAMN28462907 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242018 23991 SRR19242021 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-04 seagrass seawater 35364000 SAMN28462904 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242021 24013 SRR19242043 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 49367000 SAMN28462884 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242043 24016 SRR19242046 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 51311000 SAMN28462881 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242046 24043 SRR19242073 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2020-11 seagrass seawater 51501000 SAMN28462857 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242073 18188 SRR25047301 AMPLICON PRJNA988256 Mangrove 1.2130 N 103.7569 E Singapore: Semakau 2021/09/07 plastic plastic 71048040 SAMN36011661 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047301 18191 SRR25047304 AMPLICON PRJNA988256 Mangrove 1.2130 N 103.7569 E Singapore: Semakau 2021/09/07 plastic plastic 103131630 SAMN36011658 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047304 18193 SRR25047306 AMPLICON PRJNA988256 Mangrove 1.2130 N 103.7569 E Singapore: Semakau 2021/09/07 plastic plastic 64960014 SAMN36011657 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047306 18199 SRR25047312 AMPLICON PRJNA988256 Mangrove 1.2257 N 103.7464 E Singapore: Pulau Hantu Besar 2021/09/14 plastic plastic 67210892 SAMN36011585 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047312 18201 SRR25047314 AMPLICON PRJNA988256 Mangrove 1.2257 N 103.7464 E Singapore: Pulau Hantu Besar 2021/09/14 plastic plastic 77235396 SAMN36011583 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047314 18266 SRR25047379 AMPLICON PRJNA988256 Mangrove 1.2160 N 103.8314 E Singapore: Small Sister's Island 2021/09/09 plastic plastic 67316844 SAMN36011717 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047379 18268 SRR25047381 AMPLICON PRJNA988256 Mangrove 1.2160 N 103.8314 E Singapore: Small Sister's Island 2021/09/09 plastic plastic 66463810 SAMN36011715 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047381 18271 SRR25047384 AMPLICON PRJNA988256 Mangrove 1.2160 N 103.8314 E Singapore: Small Sister's Island 2021/09/09 plastic plastic 41644554 SAMN36011712 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047384 18396 SRR25047509 AMPLICON PRJNA988256 Mangrove 1.2256 N 103.8605 E Singapore: Kusu Island 2021/09/09 plastic plastic 40971518 SAMN36011535 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047509 20419 SRR26913625 AMPLICON PRJNA1043828 Seaweed 33.9921S 151.2312E Australia: New South Wales\, Sydney\, Bare Island 2020/03/01 Delisea pulchra host associated 114426012 SAMN38354145 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26913625 20431 SRR26913637 AMPLICON PRJNA1043828 Seaweed 33.9921S 151.2312E Australia: New South Wales\, Sydney\, Bare Island 2020/03/01 Delisea pulchra host associated 66037679 SAMN38354143 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26913637 20508 SRR27942824 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Spyridia sp. host associated 16606576 SAMN39854506 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942824 21745 SRR7877427 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 52050762 SAMN10092173 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877427