# Export date: 2026-06-15 19:44:01 # Microbe: Pontixanthobacter_484678 (ID: 8584) # Total amplicons: 18 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21612 ERR12080746 AMPLICON PRJEB66381 Saltmarsh 53.75981508N 7.71560755E 2019-07-15 salt marsh sediment 24259792 SAMEA114446183 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080746 21644 ERR12080751 AMPLICON PRJEB66381 Saltmarsh 53.75957867N 7.71678221E 2019-07-15 salt marsh sediment 50991346 SAMEA114446188 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080751 20395 ERR2319222 AMPLICON PRJEB25010 Seaweed 51.6860N 128.1835W 2015/03/18 Rock 63338918 SAMEA104603635 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2319222 21179 SRR11233192 AMPLICON PRJNA602775 Saltmarsh 41.7117N 69.9954W USA: Harwich\, MA Muddy Creek Marsh 2016-06-30 sediment 8918957 SAMN13950699 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233192 21187 SRR11233203 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9954W USA: Harwich\, MA Muddy Creek Marsh 2017-07 sediment 26638830 SAMN13950574 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233203 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 21212 SRR12852728 AMPLICON PRJNA670253 Saltmarsh 37.415258N 76.714539W USA: Gloucester Point\, VA 2018-06-29 sediment 19891809 SAMN16490905 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852728 22088 SRR22025499 AMPLICON PRJNA893704 Saltmarsh 38.77087N 76.38072W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 64577832 SAMN31431836 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025499 21631 SRR26165216 AMPLICON PRJNA1019769 Saltmarsh USA:Delaware\,St Jones Reserve 2020 sediment 5824204 SAMN37494736 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR26165216 21948 SRR5486562 AMPLICON PRJNA384656 Saltmarsh 32.5576N 80.4365W USA:South Carolina\,ACE Basin Wildlife Refuge 2010-10-10 salt marsh tidal mudflat 59673744 SAMN06843734 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486562 21954 SRR5486569 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 87488560 SAMN06843727 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486569 21966 SRR5486582 AMPLICON PRJNA384656 Saltmarsh 32.5576N 80.4365W USA:South Carolina\,ACE Basin Wildlife Refuge 2010-10-10 salt marsh tidal mudflat 65769028 SAMN06843714 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486582 21991 SRR5486612 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 68174110 SAMN06843684 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486612 21997 SRR5486620 AMPLICON PRJNA384656 Saltmarsh 39.0889N 75.4363W USA:Deleware\,St. Jones Reserve 2010-10-05 salt marsh tidal mudflat 83702476 SAMN06843676 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486620 22018 SRR5486641 AMPLICON PRJNA384656 Saltmarsh 41.5806N 70.5198W USA:Massachusetts\,Waquoit Bay 2010-10-19 salt marsh tidal mudflat 61305244 SAMN06843654 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486641 21028 SRR8207346 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 20594191 SAMN10439484 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207346 21029 SRR8207347 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 11944906 SAMN10439483 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207347 21031 SRR8207349 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2015-12-09 Spartina alterniflora sediment 21626666 SAMN10439481 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207349