# Export date: 2026-06-15 22:50:50 # Microbe: Sphingomicrobium_483265 Sphingomonas segetis (ID: 8635) # Total amplicons: 41 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22607 ERR7421949 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 25883589 SAMEA11293326 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421949 23304 SRR10723724 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Tanmen 2016-07-22 seagrass sediment 40103000 SAMN13567215 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723724 23305 SRR10723725 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Tanmen 2016-07-21 seagrass sediment 44846500 SAMN13567214 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723725 23306 SRR10723726 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Tanmen 2016-07-20 seagrass sediment 49423500 SAMN13567213 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723726 23308 SRR10723728 AMPLICON PRJNA595452 Seagrass NA China:Hainan\,Tanmen 2016-07-20 seagrass sediment 46906500 SAMN13567211 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10723728 14926 SRR12400123 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 91406705 SAMN15718362 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400123 14927 SRR12400124 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 98301057 SAMN15718361 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400124 18910 SRR19994899 AMPLICON PRJNA856080 Mangrove 0.324033 S 37.4551 E Kenya: Irangi 2018/08/01 Mangrove Topsoil 22755990 SAMN29514609 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19994899 18913 SRR19994902 AMPLICON PRJNA856080 Mangrove 0.242983 N 34.868767 E Kenya: Kakamega 2018/08/09 Mangrove Topsoil 38008160 SAMN29514606 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19994902 18914 SRR19994903 AMPLICON PRJNA856080 Mangrove 0.243517 N 34.865733 E Kenya: Kakamega 2018/08/09 Mangrove Topsoil 52627444 SAMN29514605 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19994903 22040 SRR22025447 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.36911W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 75468584 SAMN31431884 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025447 22044 SRR22025451 AMPLICON PRJNA893704 Saltmarsh 38.74663N 76.37007W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 78184478 SAMN31431880 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025451 22059 SRR22025469 AMPLICON PRJNA893704 Saltmarsh 38.7474N 76.37045W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 64270004 SAMN31431864 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025469 22060 SRR22025470 AMPLICON PRJNA893704 Saltmarsh 38.7474N 76.37045W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60500685 SAMN31431863 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025470 22061 SRR22025471 AMPLICON PRJNA893704 Saltmarsh 38.74644N 76.36811W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 63737532 SAMN31431862 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025471 22062 SRR22025472 AMPLICON PRJNA893704 Saltmarsh 38.74644N 76.36811W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 56429783 SAMN31431861 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025472 22065 SRR22025475 AMPLICON PRJNA893704 Saltmarsh 38.74721N 76.37022W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 60210525 SAMN31431858 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025475 22070 SRR22025481 AMPLICON PRJNA893704 Saltmarsh 38.7613N 76.38105W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 55304704 SAMN31431853 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025481 22696 SRR26898555 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass leaf attachment 40641500 SAMN38338623 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898555 22151 SRR27176323 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 73883696 SAMN38763950 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176323 22152 SRR27176324 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 64643402 SAMN38763949 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176324 22153 SRR27176325 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 58677090 SAMN38763948 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176325 22154 SRR27176326 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 84517418 SAMN38763947 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176326 22155 SRR27176327 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 48971716 SAMN38763946 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176327 22156 SRR27176328 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 58615784 SAMN38763945 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176328 22176 SRR27176352 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 38975214 SAMN38763893 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176352 22252 SRR27176436 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 58216540 SAMN38763957 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176436 22255 SRR27176439 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 76483312 SAMN38763954 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176439 16853 SRR28031533 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 91456800 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031533 18136 SRR28477585 AMPLICON PRJNA1089480 Mangrove 15.603303S 74.133943 E India 2023/10/12 Mangrove Terrestrial forest Sediment 94522584 SAMN40540547 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28477585 15860 SRR5814403 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 50393321 SAMN07338395 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814403 15865 SRR5814410 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 43100294 SAMN07338398 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814410 21056 SRR8931064 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:10:00Z soil 23228396 SAMN11465917 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931064 21058 SRR8931066 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:20:00Z soil 21248346 SAMN11465919 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931066 21060 SRR8931068 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:30:00Z soil 22364656 SAMN11465921 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931068 21062 SRR8931071 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:35:00Z soil 25454792 SAMN11465922 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931071 21063 SRR8931072 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:30:00Z soil 26807333 SAMN11465912 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931072 21065 SRR8931074 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:35:00Z soil 26319463 SAMN11465913 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931074 21066 SRR8931075 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:25:00Z soil 20661195 SAMN11465911 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931075 21067 SRR8931076 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:10:00Z soil 22702016 SAMN11465908 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931076 21068 SRR8931077 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:20:00Z soil 23912331 SAMN11465910 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931077