# Export date: 2026-06-15 10:43:25 # Microbe: Rubrivivax (ID: 8748) # Total amplicons: 29 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 16702 SRR11930139 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 985302685 SAMN15143745 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930139 16705 SRR11930142 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 578528504 SAMN15143742 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930142 18912 SRR19994901 AMPLICON PRJNA856080 Mangrove 0.34465 N 34.862817 E Kenya: Kakamega 2018/08/10 Mangrove Topsoil 29894713 SAMN29514607 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19994901 18913 SRR19994902 AMPLICON PRJNA856080 Mangrove 0.242983 N 34.868767 E Kenya: Kakamega 2018/08/09 Mangrove Topsoil 38008160 SAMN29514606 SINGLE Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19994902 22091 SRR23933684 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-07-29 marsh sediment 48299930 SAMN33188436 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933684 22093 SRR23933686 AMPLICON PRJNA925448 Saltmarsh 44.552025N 67.867171W USA: Milbridge\, Maine 2021-08-09 marsh sediment 62913150 SAMN33188434 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933686 22100 SRR23933743 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-06-25 marsh sediment 135641404 SAMN33188457 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933743 22103 SRR23933820 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-07-20 marsh sediment 10628846 SAMN33188474 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933820 21024 SRR8268580 AMPLICON PRJNA507498 Saltmarsh 34.42N 119.14E China:Jiangsu coastal 2014-10-15 Cynanchum rostellatum root 26064794 SAMN10496492 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR8268580 21025 SRR8268581 AMPLICON PRJNA507498 Saltmarsh 34.42N 119.14E China:Jiangsu coastal 2014-10-15 Chrysanthemum indicum root 32114894 SAMN10496491 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR8268581 21052 SRR8931060 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:05:00Z soil 23405721 SAMN11465907 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931060 21056 SRR8931064 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:10:00Z soil 23228396 SAMN11465917 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931064 21057 SRR8931065 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:05:00Z soil 24812258 SAMN11465916 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931065 21278 SRR9089762 AMPLICON PRJNA543559 Saltmarsh 30.97N 121.95E China:Shanghai 2017-03 salt marsh soil 35118272 SAMN11774854 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089762 21279 SRR9089763 AMPLICON PRJNA543559 Saltmarsh 30.97N 121.95E China:Shanghai 2017-09 salt marsh soil 34647508 SAMN11774856 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089763 21281 SRR9089765 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2017-06 salt marsh soil 32477298 SAMN11774859 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089765 21282 SRR9089766 AMPLICON PRJNA543559 Saltmarsh 30.87N 121.94E China:Shanghai 2017-06 salt marsh soil 36785210 SAMN11774863 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089766 21283 SRR9089767 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2018-12 salt marsh soil 25967872 SAMN11774872 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089767 21284 SRR9089768 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2017-09 salt marsh soil 32382182 SAMN11774860 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089768 21285 SRR9089771 AMPLICON PRJNA543559 Saltmarsh 30.87N 121.94E China:Shanghai 2017-03 salt marsh soil 38112620 SAMN11774862 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089771 21288 SRR9089774 AMPLICON PRJNA543559 Saltmarsh 30.88N 121.97E China:Shanghai 2017-06 salt marsh soil 26893146 SAMN11774867 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089774 21289 SRR9089775 AMPLICON PRJNA543559 Saltmarsh 30.88N 121.97E China:Shanghai 2017-03 salt marsh soil 33409194 SAMN11774866 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089775 21290 SRR9089776 AMPLICON PRJNA543559 Saltmarsh 30.88N 121.97E China:Shanghai 2017-12 salt marsh soil 43376508 SAMN11774869 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089776 21292 SRR9089778 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2018-07 salt marsh soil 43555302 SAMN11774871 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089778 16623 SRR9593087 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 85553827 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593087 16626 SRR9593090 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 83283018 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593090