# Export date: 2026-06-15 11:42:16 # Microbe: Propionivibrio (ID: 8794) # Total amplicons: 65 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 16700 SRR11930137 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 1010770215 SAMN15143747 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930137 16701 SRR11930138 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 674363154 SAMN15143746 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930138 16742 SRR12070305 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2018/07/17 Mangrove soil sample 92581808 SAMN15317497 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070305 16699 SRR12070311 AMPLICON PRJNA640402 Mangrove China:Shenzhen 2018/07/17 Mangrove soil sample 89306368 SAMN15317493 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12070311 15020 SRR12164887 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 102329488 SAMN15447435 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164887 15023 SRR12164890 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 98471946 SAMN15447432 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164890 15024 SRR12164891 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 100702242 SAMN15447431 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164891 14973 SRR12164903 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 98566801 SAMN15447447 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164903 14974 SRR12164904 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 97331435 SAMN15447446 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164904 14976 SRR12164906 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 87681007 SAMN15447444 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164906 15027 SRR12164909 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 97941148 SAMN15447441 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164909 15031 SRR12164913 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 101900339 SAMN15447429 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164913 15032 SRR12164914 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 97078976 SAMN15447428 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164914 14926 SRR12400123 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 91406705 SAMN15718362 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400123 14927 SRR12400124 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 98301057 SAMN15718361 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400124 14928 SRR12400125 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 97654572 SAMN15718360 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400125 20953 SRR12852812 AMPLICON PRJNA670253 Saltmarsh 31.33944N 81.46722W USA: Darien\, GA 2018-06-23 sediment 46811344 SAMN16490830 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852812 20958 SRR12852819 AMPLICON PRJNA670253 Saltmarsh 29.19444N 83W USA: Cedar Key\, FL 2018-06-21 sediment 2498550 SAMN16490800 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852819 20972 SRR12852841 AMPLICON PRJNA670253 Saltmarsh 30.09861N 84.14806W USA: St. Marks\, FL 2018-06-19 sediment 4772277 SAMN16490780 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852841 21019 SRR12852918 AMPLICON PRJNA670253 Saltmarsh 29.19444N 83W USA: Cedar Key\, FL 2018-06-21 sediment 7830307 SAMN16490804 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852918 14949 SRR15606919 AMPLICON PRJNA757625 Mangrove 22.5286 N 114.0028 E China 2025/05/20 Mangrove mangrove sidiments 42286286 SAMN20969817 PAIRED Illumina MiSeq OTHER 16S https://www.ncbi.nlm.nih.gov/sra/SRR15606919 14957 SRR15606927 AMPLICON PRJNA757625 Mangrove 22.5286 N 114.0028 E China 2025/05/20 Mangrove mangrove sidiments 45046456 SAMN20969823 PAIRED Illumina MiSeq OTHER 16S https://www.ncbi.nlm.nih.gov/sra/SRR15606927 14960 SRR15606930 AMPLICON PRJNA757625 Mangrove 22.5286 N 114.0028 E China 2025/05/20 Mangrove mangrove sidiments 37249954 SAMN20969820 PAIRED Illumina MiSeq OTHER 16S https://www.ncbi.nlm.nih.gov/sra/SRR15606930 23957 SRR18298478 AMPLICON PRJNA774145 Seagrass 19.62856 N 85.17197 E India 2019-03-14 seagrass sediment 12852470 SAMN22568736 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298478 23958 SRR18298479 AMPLICON PRJNA774145 Seagrass 19.62856 N 85.17197 E India 2019-03-14 seagrass sediment 15018638 SAMN22568737 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298479 19096 SRR19630986 AMPLICON PRJNA847709 Mangrove 22.52666667N 114.0075 E China 2025/08/20 Mangrove estuarine mud 43225406 SAMN28982395 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR19630986 22051 SRR22025460 AMPLICON PRJNA893704 Saltmarsh 38.75742N 76.3789W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 77126328 SAMN31431872 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025460 22091 SRR23933684 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-07-29 marsh sediment 48299930 SAMN33188436 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933684 22092 SRR23933685 AMPLICON PRJNA925448 Saltmarsh 44.61485N 67.74326W USA: Addison\, Maine 2021-08-03 marsh sediment 47918410 SAMN33188435 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933685 22113 SRR23933945 AMPLICON PRJNA925448 Saltmarsh 39.5056N 74.4268W USA: Galloway\, New Jersey 2021-06-25 marsh sediment 149488572 SAMN33188275 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933945 17979 SRR23945118 AMPLICON PRJNA947804 Mangrove 12.841432S 45.184514 E Mayotte: Dembeni 2025/11/18 marine biofilm Large blue-green benthic biolfilm 10507221 SAMN33866967 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945118 18355 SRR25047468 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 seawater seawater 55721120 SAMN36011604 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047468 16931 SRR25258300 AMPLICON PRJNA994497 Mangrove 16.20 N 61.27 W Guadeloupe 2018/07/19 Mangrove coastal sea water 10488177 SAMN36430096 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR25258300 21621 SRR26165206 AMPLICON PRJNA1019769 Saltmarsh USA:Delaware\,St Jones Reserve 2020 sediment 27129084 SAMN37494726 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR26165206 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 22152 SRR27176324 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 64643402 SAMN38763949 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176324 22153 SRR27176325 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 58677090 SAMN38763948 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176325 22173 SRR27176349 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 58424920 SAMN38763866 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176349 22174 SRR27176350 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 51549286 SAMN38763910 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176350 22181 SRR27176358 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 39685216 SAMN38763888 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176358 22201 SRR27176380 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 24656488 SAMN38763993 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176380 22221 SRR27176400 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 43204120 SAMN38763879 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176400 22231 SRR27176411 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 45586900 SAMN38764009 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176411 18137 SRR28477586 AMPLICON PRJNA1089480 Mangrove 15.404751S 73.906929 E India 2023/09/12 Mangrove mangrove sediment 75611742 SAMN40540546 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28477586 22306 SRR28820984 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-09 salt marsh soil 238186718 SAMN41100765 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820984 22313 SRR28820992 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-05 salt marsh soil 84416052 SAMN41100887 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820992 22323 SRR28821005 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-28 salt marsh soil 64257480 SAMN41100875 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821005 22332 SRR28821016 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-22 salt marsh soil 68112688 SAMN41100850 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821016 22334 SRR28821019 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-06 salt marsh soil 53671310 SAMN41100731 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821019 22341 SRR28821027 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-14 salt marsh soil 81307324 SAMN41100813 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821027 22345 SRR28821032 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-14 salt marsh soil 258195994 SAMN41100808 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821032 22348 SRR28821035 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-14 salt marsh soil 232016218 SAMN41100806 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821035 22357 SRR28821079 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-16 salt marsh soil 120605884 SAMN41100837 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821079 22368 SRR28821107 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-02-01 salt marsh soil 35774452 SAMN41100956 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821107 22379 SRR28821119 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-19 salt marsh soil 173778136 SAMN41100917 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821119 15835 SRR5814366 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 72056899 SAMN07338382 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814366 21908 SRR6398154 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38373W USA 2013-07-07 Salt marsh sediment 9031955 SAMN08214118 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398154 21922 SRR6398169 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38376002W USA 2013-07-07 Salt marsh sediment 4076960 SAMN08214143 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398169 21068 SRR8931077 AMPLICON PRJNA533745 Saltmarsh 48.15N 134.61E China: Sanjiang wetland 2017-12-12T10:20:00Z soil 23912331 SAMN11465910 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931077 21284 SRR9089768 AMPLICON PRJNA543559 Saltmarsh 30.89N 121.97E China:Shanghai 2017-09 salt marsh soil 32382182 SAMN11774860 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9089768 16623 SRR9593087 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 85553827 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593087 16626 SRR9593090 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 83283018 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593090 16653 SRR9593117 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2017/12/04 Mud estuarine mud 133118514 SAMN12124989 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593117 16657 SRR9593121 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2017/12/04 Mud estuarine mud 84154805 SAMN12124989 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593121 16685 SRR9593149 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 117392425 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593149