# Export date: 2026-06-13 07:21:34 # Microbe: Sideroxydans Sideroxydans lithotrophicus (ID: 8828) # Total amplicons: 28 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 16702 SRR11930139 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 985302685 SAMN15143745 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930139 15019 SRR12164886 AMPLICON PRJNA644071 Mangrove China:Shenzhen 2019/07/18 Mangrove soil sample 93581805 SAMN15447436 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12164886 21205 SRR12852711 AMPLICON PRJNA670253 Saltmarsh 29.755N 85.00333W USA: Apalachicola\, FL 2018-06-20 sediment 80581393 SAMN16490921 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852711 20913 SRR12852730 AMPLICON PRJNA670253 Saltmarsh 30.05833N 89.79194W USA: New Orleans\, LA 2018-06-15 sediment 45901623 SAMN16490724 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852730 22148 SRR27176320 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 75160854 SAMN38763952 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176320 22154 SRR27176326 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 84517418 SAMN38763947 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176326 22177 SRR27176353 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 48773906 SAMN38763892 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176353 22180 SRR27176357 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 43669804 SAMN38763889 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176357 22182 SRR27176359 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 44387356 SAMN38763887 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176359 22184 SRR27176361 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 41336854 SAMN38763885 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176361 22248 SRR27176432 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 27659878 SAMN38763961 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176432 22251 SRR27176435 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 18199426 SAMN38763958 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176435 22252 SRR27176436 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 58216540 SAMN38763957 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176436 22256 SRR27176440 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 79093498 SAMN38763953 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176440 22263 SRR27176448 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 46666852 SAMN38763901 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176448 22265 SRR27176450 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 40731646 SAMN38763900 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176450 22268 SRR27176453 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 49910030 SAMN38763897 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176453 22277 SRR27176466 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 37751208 SAMN38763967 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176466 22278 SRR27176467 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 45648810 SAMN38763966 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176467 22316 SRR28820996 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-28 salt marsh soil 97378316 SAMN41100883 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820996 22329 SRR28821011 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-22 salt marsh soil 168201810 SAMN41100855 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821011 22354 SRR28821059 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-19 salt marsh soil 74241048 SAMN41100927 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821059 21902 SRR6371074 AMPLICON PRJNA422172 Saltmarsh 37.77N 119.09E China 2017-10-04 Salt marsh soils 34358548 SAMN08166698 PAIRED Illumina MiniSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR6371074 21053 SRR8931061 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:00:00Z soil 23101600 SAMN11465915 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931061 21056 SRR8931064 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:10:00Z soil 23228396 SAMN11465917 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931064 21057 SRR8931065 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:05:00Z soil 24812258 SAMN11465916 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931065 21058 SRR8931066 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:20:00Z soil 21248346 SAMN11465919 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931066 21059 SRR8931067 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:15:00Z soil 25015794 SAMN11465918 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931067