# Export date: 2026-06-15 11:42:28 # Microbe: Rhabdochromatium Rhabdochromatium marinum (ID: 8909) # Total amplicons: 23 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21358 SRR11232910 AMPLICON PRJNA602775 Saltmarsh 41.7122N 69.9947W USA: Harwich\, MA Muddy Creek Marsh 2017-07 sediment 14281780 SAMN13950615 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232910 21371 SRR11232942 AMPLICON PRJNA602775 Saltmarsh 41.712N 69.9955W USA: Harwich\, MA Muddy Creek Marsh 2016-10-12 sediment 9059164 SAMN13950585 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232942 20838 SRR11233027 AMPLICON PRJNA602775 Saltmarsh 41.7389N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2016-08-22 sediment 6199718 SAMN13950716 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233027 21177 SRR11233184 AMPLICON PRJNA602775 Saltmarsh 41.7386N 69.97W USA: Orleans\, MA marsh off of Davis Road 2015-08-26 sediment 10350618 SAMN13950706 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233184 20865 SRR11233185 AMPLICON PRJNA602775 Saltmarsh 41.7387N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2015-08-26 sediment 13414094 SAMN13950705 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233185 21397 SRR11233187 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2015-08-26 sediment 12926978 SAMN13950702 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233187 20877 SRR11233210 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9954W USA: Harwich\, MA Muddy Creek Marsh 2016-06 sediment 14103156 SAMN13950571 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233210 20894 SRR11233249 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2015-06-07 sediment 5442832 SAMN13950677 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233249 23647 SRR12086834 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 304651991 SAMN15364577 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086834 20947 SRR12852801 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 53317782 SAMN16490840 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852801 21269 SRR12852901 AMPLICON PRJNA670253 Saltmarsh 29.762475N 81.264453W USA: St. Augustine\, FL 2018-06-22 sediment 56148738 SAMN16490820 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852901 17762 SRR21291233 AMPLICON PRJNA874590 Mangrove 14.60000278N 61.01000000 W Martinique:Cohe du Lamentin 2025/06/18 Mangrove sediment 25570824 SAMN30556393 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR21291233 21932 SRR6398179 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383765W USA 2013-07-07 Salt marsh sediment 11092099 SAMN08214128 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398179 21933 SRR6398181 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38376008W USA 2013-07-07 Salt marsh sediment 7609187 SAMN08214149 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398181 21940 SRR6398188 AMPLICON PRJNA423244 Saltmarsh 41.35171N 70.38376W USA 2013-07-07 Salt marsh sediment 13962225 SAMN08214113 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398188 21944 SRR6398194 AMPLICON PRJNA423244 Saltmarsh 41.35173N 70.38376W USA 2013-07-07 Salt marsh sediment 16591133 SAMN08214111 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398194 21945 SRR6398195 AMPLICON PRJNA423244 Saltmarsh 41.35174N 70.38376W USA 2013-07-07 Salt marsh sediment 11920222 SAMN08214110 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398195 21745 SRR7877427 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 52050762 SAMN10092173 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877427 21759 SRR7877444 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 54988665 SAMN10092143 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877444 21771 SRR7877457 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-06-26 Salt marsh sediment 22516968 SAMN10092047 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877457 21855 SRR7877549 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 59906591 SAMN10092162 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877549 21864 SRR7877560 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-06-26 Salt marsh sediment 44209223 SAMN10092061 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877560 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789