# Export date: 2026-06-15 10:10:13 # Microbe: Thiorhodovibrio_602667 Thiorhodovibrio sp000228725 (ID: 8911) # Total amplicons: 28 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19455 ERR2508665 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 19361871 SAMEA1099958 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508665 15052 SRR10393005 AMPLICON PRJNA578400 Mangrove 18.3206508 N 64.7621709 W Virgin Islands: Southern Shore of St. John 2017/07/23 Seawater Northeastern Caribbean Seawater 43219188 SAMN13071672 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR10393005 21135 SRR11232914 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2015-10-22 sediment 9029940 SAMN13950495 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232914 21142 SRR11233051 AMPLICON PRJNA602775 Saltmarsh 41.7396N 69.9691W USA: Orleans\, MA marsh off of Crows Landing 2015-06-07 sediment 6618748 SAMN13950679 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233051 21377 SRR11233061 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2016-03-22 sediment 6549835 SAMN13950666 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233061 20842 SRR11233082 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2016-08-25 sediment 24208563 SAMN13950648 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233082 20864 SRR11233177 AMPLICON PRJNA602775 Saltmarsh 41.712N 69.9955W USA: Harwich\, MA Muddy Creek Marsh 2015-08-19 sediment 9761229 SAMN13950712 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233177 21177 SRR11233184 AMPLICON PRJNA602775 Saltmarsh 41.7386N 69.97W USA: Orleans\, MA marsh off of Davis Road 2015-08-26 sediment 10350618 SAMN13950706 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233184 21397 SRR11233187 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2015-08-26 sediment 12926978 SAMN13950702 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233187 21401 SRR11233237 AMPLICON PRJNA602775 Saltmarsh 41.712N 69.9955W USA: Harwich\, MA Muddy Creek Marsh 2015-06-07 sediment 7932279 SAMN13950688 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233237 21198 SRR11233246 AMPLICON PRJNA602775 Saltmarsh 41.7387N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2015-06-07 sediment 8479582 SAMN13950681 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233246 20894 SRR11233249 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2015-06-07 sediment 5442832 SAMN13950677 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233249 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 20563 SRR12125036 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 40040533 SAMN15414950 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125036 20581 SRR12125055 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 45817030 SAMN15414970 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125055 21695 SRR5360925 AMPLICON PRJNA379357 Saltmarsh 53.76201N 7.72231E Germany: Spiekeroog 2015 Salt marsh sediment 110789471 SAMN06606313 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360925 21906 SRR6398152 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837W USA 2013-07-07 Salt marsh sediment 13867646 SAMN08214116 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398152 21912 SRR6398158 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38378W USA 2013-07-07 Salt marsh sediment 13380045 SAMN08214122 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398158 21916 SRR6398162 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837604W USA 2013-07-07 Salt marsh sediment 6609904 SAMN08214136 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398162 21918 SRR6398165 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.3837609W USA 2013-07-07 Salt marsh sediment 11428301 SAMN08214141 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398165 21929 SRR6398176 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383762W USA 2013-07-07 Salt marsh sediment 12102626 SAMN08214125 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398176 21932 SRR6398179 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383765W USA 2013-07-07 Salt marsh sediment 11092099 SAMN08214128 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398179 21933 SRR6398181 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38376008W USA 2013-07-07 Salt marsh sediment 7609187 SAMN08214149 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398181 21940 SRR6398188 AMPLICON PRJNA423244 Saltmarsh 41.35171N 70.38376W USA 2013-07-07 Salt marsh sediment 13962225 SAMN08214113 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398188 21942 SRR6398190 AMPLICON PRJNA423244 Saltmarsh 41.351771N 70.38376W USA 2013-07-07 Salt marsh sediment 11885317 SAMN08214107 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398190 21944 SRR6398194 AMPLICON PRJNA423244 Saltmarsh 41.35173N 70.38376W USA 2013-07-07 Salt marsh sediment 16591133 SAMN08214111 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398194 21945 SRR6398195 AMPLICON PRJNA423244 Saltmarsh 41.35174N 70.38376W USA 2013-07-07 Salt marsh sediment 11920222 SAMN08214110 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398195 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789