# Export date: 2026-06-15 11:42:24 # Microbe: Allochromatium (ID: 8912) # Total amplicons: 31 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21133 SRR11232909 AMPLICON PRJNA602775 Saltmarsh 41.7122N 69.9947W USA: Harwich\, MA Muddy Creek Marsh 2017-08 sediment 12194878 SAMN13950616 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11232909 20838 SRR11233027 AMPLICON PRJNA602775 Saltmarsh 41.7389N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2016-08-22 sediment 6199718 SAMN13950716 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233027 21170 SRR11233120 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2017-07 sediment 17193832 SAMN13950526 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233120 21394 SRR11233162 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2017-08 sediment 25268554 SAMN13950485 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233162 20865 SRR11233185 AMPLICON PRJNA602775 Saltmarsh 41.7387N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2015-08-26 sediment 13414094 SAMN13950705 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233185 21198 SRR11233246 AMPLICON PRJNA602775 Saltmarsh 41.7387N 69.9699W USA: Orleans\, MA marsh off of Davis Road 2015-06-07 sediment 8479582 SAMN13950681 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233246 23508 SRR11742196 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 23004656 SAMN14819905 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742196 23509 SRR11742197 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 45428343 SAMN14819904 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742197 23510 SRR11742198 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 26200326 SAMN14819903 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742198 23511 SRR11742199 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 24871819 SAMN14819902 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742199 21209 SRR12852717 AMPLICON PRJNA670253 Saltmarsh 30.417349N 87.828499W USA: Weeks Bay\, AL 2018-06-18 sediment 35820826 SAMN16490915 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852717 21269 SRR12852901 AMPLICON PRJNA670253 Saltmarsh 29.762475N 81.264453W USA: St. Augustine\, FL 2018-06-22 sediment 56148738 SAMN16490820 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852901 20649 SRR13379996 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2016-07 Salt marsh sediment 10260024 SAMN17251861 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13379996 20739 SRR13380102 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 26798348 SAMN17251921 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380102 20740 SRR13380104 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 25597555 SAMN17251780 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380104 17735 SRR21290764 AMPLICON PRJNA874575 Mangrove Martinique:Pointe Marin 2025/06/18 Mangrove sediment 12998533 SAMN30553744 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR21290764 17754 SRR21291225 AMPLICON PRJNA874590 Mangrove 14.44N 61.8700000 W Martinique:Pointe Marin 2025/06/18 Mangrove sediment 13554990 SAMN30556369 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR21291225 17785 SRR21291256 AMPLICON PRJNA874590 Mangrove 14.44 N 61.8700000 W Martinique:Pointe Marin 2025/06/18 Mangrove sediment 24573731 SAMN30556372 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR21291256 22048 SRR22025457 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 68284997 SAMN31431830 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025457 22058 SRR22025468 AMPLICON PRJNA893704 Saltmarsh 38.76712N 76.38478W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 66709287 SAMN31431829 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025468 17979 SRR23945118 AMPLICON PRJNA947804 Mangrove 12.841432S 45.184514 E Mayotte: Dembeni 2025/11/18 marine biofilm Large blue-green benthic biolfilm 10507221 SAMN33866967 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23945118 18301 SRR25047414 AMPLICON PRJNA988256 Mangrove 1.4450 N 103.7335 E Singapore: Sungei Buloh Wetland Reserve 2021/07/27 sediment sediment 57752870 SAMN36011653 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047414 18370 SRR25047483 AMPLICON PRJNA988256 Mangrove 1.4459 N 103.7078 E Singapore: Lim Chu Kang 2021/07/28 sediment sediment 63175084 SAMN36011559 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047483 22239 SRR27176421 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 49665108 SAMN38763985 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176421 22244 SRR27176426 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 31461756 SAMN38763981 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176426 22380 SRR28821120 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-19 salt marsh soil 94591056 SAMN41100916 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821120 22135 SRR6761097 AMPLICON PRJNA433990 Saltmarsh 29.86375N 88.841472W USA: Chandeleur Islands 2016-11-15 salt marsh sediment 214583502 SAMN08536651 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761097 16612 SRR9593076 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/04/01 Mud estuarine mud 56355281 SAMN12124993 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593076 16639 SRR9593103 AMPLICON PRJNA550512 Mangrove 6.9493889 N 100.826722 E Thailand 2018/04/01 Mud estuarine mud 56325182 SAMN12124978 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593103 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789