# Export date: 2026-06-12 19:24:34 # Microbe: Alishewanella_662828 (ID: 8955) # Total amplicons: 68 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 16700 SRR11930137 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 1010770215 SAMN15143747 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930137 16702 SRR11930139 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 rice rhizospheric soil rice soil 985302685 SAMN15143745 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930139 16703 SRR11930140 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 832697366 SAMN15143744 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930140 16705 SRR11930142 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 578528504 SAMN15143742 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930142 20610 SRR12125089 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 55787987 SAMN15414965 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125089 21414 SRR12995213 AMPLICON PRJNA666636 Saltmarsh 31.38894N 81.27755W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 43815062 SAMN16678238 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995213 21425 SRR12995226 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.0309W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 47525846 SAMN16678410 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995226 21451 SRR12995255 AMPLICON PRJNA666636 Saltmarsh 31.39001N 81.2758W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 43684040 SAMN16678257 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995255 21452 SRR12995256 AMPLICON PRJNA666636 Saltmarsh 31.39001N 81.2758W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 42935056 SAMN16678256 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995256 21456 SRR12995263 AMPLICON PRJNA666636 Saltmarsh 31.3893N 81.27705W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 41106772 SAMN16678250 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995263 21460 SRR12995267 AMPLICON PRJNA666636 Saltmarsh 31.38866N 81.27693W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 41610278 SAMN16678246 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995267 21461 SRR12995268 AMPLICON PRJNA666636 Saltmarsh 31.38983N 81.27757W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 40671036 SAMN16678245 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995268 21462 SRR12995269 AMPLICON PRJNA666636 Saltmarsh 31.38983N 81.27757W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 45563528 SAMN16678244 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995269 21468 SRR12995276 AMPLICON PRJNA666636 Saltmarsh 31.38894N 81.27755W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 41500842 SAMN16678239 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995276 21496 SRR12995308 AMPLICON PRJNA666636 Saltmarsh 31.38892N 81.27632W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 40249356 SAMN16678309 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995308 21501 SRR12995313 AMPLICON PRJNA666636 Saltmarsh 31.38983N 81.27757W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 41162996 SAMN16678304 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995313 21503 SRR12995315 AMPLICON PRJNA666636 Saltmarsh 31.38943N 81.27757W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 43909940 SAMN16678302 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995315 21528 SRR12995343 AMPLICON PRJNA666636 Saltmarsh 31.97435N 81.03093W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 44606716 SAMN16678379 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995343 21556 SRR12995372 AMPLICON PRJNA666636 Saltmarsh 31.97528N 81.03122W USA: Georgia 2019-07-22 Sporobolus alterniflorus sediment 46863206 SAMN16678352 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995372 21569 SRR12995387 AMPLICON PRJNA666636 Saltmarsh 31.38914N 81.27642W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 42833150 SAMN16678339 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995387 20651 SRR13380001 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 32276625 SAMN17251875 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380001 20680 SRR13380031 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 35321681 SAMN17251816 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380031 20697 SRR13380050 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 30057650 SAMN17251770 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380050 20726 SRR13380083 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 27399285 SAMN17251911 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380083 20751 SRR13380115 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 33892509 SAMN17251779 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380115 20766 SRR13380132 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 22852716 SAMN17251869 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380132 20781 SRR13380147 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 35629072 SAMN17251825 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380147 15598 SRR14741288 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Sediment 66333000 SAMN19580900 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741288 14883 SRR15928200 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 17542911 SAMN21466975 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928200 17804 SRR17658321 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 50439119 SAMN25078434 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658321 17811 SRR17658328 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 35890427 SAMN25078428 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658328 17816 SRR17658333 AMPLICON PRJNA798089 Mangrove 33.8568146S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 35507743 SAMN25078388 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658333 17819 SRR17658336 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/19 marine biofilm biofilm 38976561 SAMN25078421 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658336 17824 SRR17658341 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 49784213 SAMN25078416 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658341 17838 SRR17658355 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 45125646 SAMN25078386 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658355 17839 SRR17658356 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 41295050 SAMN25078403 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658356 17840 SRR17658357 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 51982335 SAMN25078402 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658357 17841 SRR17658358 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 29882517 SAMN25078401 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658358 17844 SRR17658361 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 47115733 SAMN25078398 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658361 17853 SRR17658370 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 59267619 SAMN25078453 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658370 17856 SRR17658373 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 41260526 SAMN25078450 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658373 17858 SRR17658375 AMPLICON PRJNA798089 Mangrove 33.8469058S 151.2024254 E Australia: Sawmillers Reserve\, Sydney 2018/12/20 marine biofilm biofilm 44483384 SAMN25078448 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658375 23749 SRR18298270 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 24239560 SAMN22568715 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298270 23750 SRR18298271 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14857 E India 2018-04-21 seagrass sediment 8130094 SAMN22568714 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298271 23829 SRR18298350 AMPLICON PRJNA774145 Seagrass 19.540351 N 85.158805 E India 2018-04-26 seagrass sediment 4338060 SAMN22568804 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298350 23877 SRR18298398 AMPLICON PRJNA774145 Seagrass 19.56218 N 85.18679 E India 2018-04-14 seagrass sediment 5941179 SAMN22568847 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298398 23971 SRR18298492 AMPLICON PRJNA774145 Seagrass 19.5113 N 85.14544 E India 2018-04-21 seagrass sediment 8739679 SAMN22568726 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298492 23972 SRR18298493 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 12507265 SAMN22568727 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298493 18353 SRR25047466 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 seawater seawater 70462896 SAMN36011606 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047466 18362 SRR25047475 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 plastic plastic 79446542 SAMN36011598 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047475 18367 SRR25047480 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 plastic plastic 64213534 SAMN36011593 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047480 18530 SRR27644623 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 15338580 SAMN39505275 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644623 18133 SRR28477582 AMPLICON PRJNA1089480 Mangrove 15.404751S 73.906929 E India 2023/09/12 Mangrove Mangrove Litter 71700158 SAMN40540550 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28477582 17790 SRR4858369 AMPLICON PRJNA351850 Mangrove 21.67 N 88.15 E India:West Bengal'' 2014/07/25 bacterioplankton Mooriganga estuary in Sundarbans mangrove ecoregion 561760176 SAMN05954869 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858369 15826 SRR5814353 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 63536408 SAMN07338401 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814353 15850 SRR5814388 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 82473348 SAMN07338412 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814388 15866 SRR5814411 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 42090820 SAMN07338397 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814411 16613 SRR9593077 AMPLICON PRJNA550512 Mangrove 6.8700833 N 100.969027 E Thailand 2018/04/01 Mud estuarine mud 72950178 SAMN12124984 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593077 16682 SRR9593146 AMPLICON PRJNA550512 Mangrove 6.89094 N 101.004166 E Thailand 2017/12/04 Mud estuarine mud 168612860 SAMN12124974 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593146