# Export date: 2026-06-15 21:43:52 # Microbe: Photobacterium Photobacterium ganghwense (ID: 9117) # Total amplicons: 41 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 23460 SRR11742148 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-09-22 seagrass sediment 53908374 SAMN14819948 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742148 23480 SRR11742168 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-09-22 seagrass sediment 19335739 SAMN14819930 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742168 23513 SRR11742201 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 22294266 SAMN14819900 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742201 23532 SRR11742220 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-07-01 seagrass sediment 24742591 SAMN14819979 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742220 23534 SRR11742222 AMPLICON PRJNA630066 Seagrass 29.9276 N 88.82931 W USA: Chandeleur Islands\, Lousiana 2015-07-01 seagrass sediment 48474690 SAMN14819977 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742222 16703 SRR11930140 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 832697366 SAMN15143744 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930140 16705 SRR11930142 AMPLICON PRJNA603641 Mangrove 21.9497 N 89.1833 E India: Sundarban 2018/12/05 Mangrove mangrove sediments 578528504 SAMN15143742 PAIRED Illumina HiSeq 2500 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11930142 14978 SRR15566177 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 40393598 SAMN20864011 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566177 21296 SRR1756787 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 36735750 SAMN03283756 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756787 21308 SRR1756868 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12738900 SAMN03283768 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756868 21311 SRR1756883 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 22924500 SAMN03283771 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756883 21315 SRR1756933 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12551850 SAMN03283775 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756933 21316 SRR1756934 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 9902100 SAMN03283776 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756934 21325 SRR1756944 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 16671450 SAMN03283785 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756944 21327 SRR1756946 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 15395850 SAMN03283787 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756946 21333 SRR1756953 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12138000 SAMN03283793 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756953 21345 SRR1756980 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 14131500 SAMN03283811 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756980 23747 SRR18298268 AMPLICON PRJNA774145 Seagrass 19.51159 N 85.14737 E India 2018-04-21 seagrass sediment 16889876 SAMN22568717 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298268 23925 SRR18298446 AMPLICON PRJNA774145 Seagrass 19.586377 N 85.168426 E India 2018-04-26 seagrass sediment 8808154 SAMN22568766 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298446 23949 SRR18298470 AMPLICON PRJNA774145 Seagrass 19.5116 N 85.15327 E India 2018-04-21 seagrass sediment 13161873 SAMN22568729 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298470 23967 SRR18298488 AMPLICON PRJNA774145 Seagrass 19.5113 N 85.14544 E India 2018-04-21 seagrass sediment 15940423 SAMN22568722 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298488 23971 SRR18298492 AMPLICON PRJNA774145 Seagrass 19.5113 N 85.14544 E India 2018-04-21 seagrass sediment 8739679 SAMN22568726 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR18298492 22091 SRR23933684 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-07-29 marsh sediment 48299930 SAMN33188436 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933684 22100 SRR23933743 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-06-25 marsh sediment 135641404 SAMN33188457 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933743 22103 SRR23933820 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-07-20 marsh sediment 10628846 SAMN33188474 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933820 22104 SRR23933821 AMPLICON PRJNA925448 Saltmarsh 44.552025N 67.867171W USA: Milbridge\, Maine 2021-07-28 marsh sediment 77451572 SAMN33188473 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933821 22113 SRR23933945 AMPLICON PRJNA925448 Saltmarsh 39.5056N 74.4268W USA: Galloway\, New Jersey 2021-06-25 marsh sediment 149488572 SAMN33188275 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933945 16855 SRR26222186 AMPLICON PRJNA1021532 Mangrove 15.2933 N 73.4958 E India 2020/08/05 Mangrove mangrove sediment 871077000 SAMN37558049 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222186 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 21711 SRR5360941 AMPLICON PRJNA379357 Saltmarsh 53.76219N 7.72282E Germany: Spiekeroog 2014 Salt marsh sediment 76814122 SAMN06606297 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360941 22140 SRR6761103 AMPLICON PRJNA433990 Saltmarsh 29.86375N 88.841472W USA: Chandeleur Islands 2016-09-20 salt marsh sediment 212416904 SAMN08536649 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6761103 15126 SRR9213686 AMPLICON PRJNA543557 Mangrove 9.58 N 79.17 E India:Puthuvype Mangrove 2017/10/01 Puthuvype and Mangalavanam Sediment samples are collected from Puthuvype mangrove region 150242400 SAMN11772331 PAIRED Illumina HiSeq 4000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR9213686 16612 SRR9593076 AMPLICON PRJNA550512 Mangrove 6.8328889 N 101.000333 E Thailand 2018/04/01 Mud estuarine mud 56355281 SAMN12124993 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593076 16613 SRR9593077 AMPLICON PRJNA550512 Mangrove 6.8700833 N 100.969027 E Thailand 2018/04/01 Mud estuarine mud 72950178 SAMN12124984 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593077 16617 SRR9593081 AMPLICON PRJNA550512 Mangrove 6.8700833 N 100.969027 E Thailand 2018/04/01 Mud estuarine mud 44319544 SAMN12124984 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593081 16628 SRR9593092 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2018/07/31 Mud estuarine mud 46298135 SAMN12124991 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593092 16640 SRR9593104 AMPLICON PRJNA550512 Mangrove 6.9493889 N 100.826722 E Thailand 2018/04/01 Mud estuarine mud 53085658 SAMN12124978 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593104 16663 SRR9593127 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2018/04/01 Mud estuarine mud 30667032 SAMN12124987 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593127