# Export date: 2026-06-15 20:23:14 # Microbe: Vibrio_678715 Vibrio quintilis (ID: 9189) # Total amplicons: 67 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22447 DRR403359 AMPLICON PRJDB14309 Seagrass 35.315753 N 139.789322 E Japan:Chiba\, Futsu 2019-07-04 seagrass Seagrass root 74602353 SAMD00532445 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403359 22475 DRR403390 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass leaf 72676183 SAMD00532476 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403390 22479 DRR403394 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass root 76951296 SAMD00532480 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403394 22481 DRR403396 AMPLICON PRJDB14309 Seagrass 35.314831 N 139.787622 E Japan:Chiba\, Futsu 2019-09-30 seagrass Seagrass root 82588388 SAMD00532482 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403396 22668 ERR7422010 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 21296316 SAMEA11293387 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7422010 15038 SRR10392991 AMPLICON PRJNA578400 Mangrove 18.3185583 N 64.7242358 W Virgin Islands: Southern Shore of St. John 2017/07/23 Seawater Northeastern Caribbean Seawater 42232256 SAMN13071685 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR10392991 23187 SRR11244496 AMPLICON PRJNA574590 Seagrass 20.15995 N 40.216967 E Saudi Arabia 2016-02-26 Thalassia hemprichii leaf 41322092 SAMN12860670 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11244496 23190 SRR11244499 AMPLICON PRJNA574590 Seagrass 25.361683 N 36.910917 E Saudi Arabia 2016-02-22 Halodule uninervis leaf 47087079 SAMN12860667 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11244499 23326 SRR11249256 AMPLICON PRJNA610593 Seagrass 19.270667 N 40.898117 E Saudi Arabia 2016-02 Thalassia hemprichii root 9012080854 SAMN14306712 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11249256 23327 SRR11249257 AMPLICON PRJNA610593 Seagrass 25.361683 N 36.910917 E Saudi Arabia 2016-02 Halodule uninervis root 7237543913 SAMN14306711 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11249257 23390 SRR11489891 AMPLICON PRJNA623164 Seagrass 30.0631 N 84.1665 W USA: Florida\, Apalachee Bay 2016-09-21 Thalassia testudinum blade surface 10029289 SAMN14540235 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11489891 23448 SRR11742136 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-06-30 seagrass sediment 36352959 SAMN14819959 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742136 23504 SRR11742192 AMPLICON PRJNA630066 Seagrass 29.89545 N 88.82778 W USA: Chandeleur Islands\, Lousiana 2015-09-21 seagrass sediment 21983313 SAMN14819908 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742192 23530 SRR11742218 AMPLICON PRJNA630066 Seagrass 29.93338 N 88.82949 W USA: Chandeleur Islands\, Lousiana 2015-07-01 seagrass sediment 22100955 SAMN14819981 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11742218 23647 SRR12086834 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 304651991 SAMN15364577 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086834 23651 SRR12086838 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 341598586 SAMN15364573 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086838 23654 SRR12086841 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 281011515 SAMN15364570 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086841 23656 SRR12086843 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Spartina alterniflora sediment 300990431 SAMN15364581 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086843 23660 SRR12086847 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 367184384 SAMN15364569 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086847 21488 SRR12995297 AMPLICON PRJNA666636 Saltmarsh 31.38957N 81.27559W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 42651928 SAMN16678275 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995297 21496 SRR12995308 AMPLICON PRJNA666636 Saltmarsh 31.38892N 81.27632W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 40249356 SAMN16678309 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995308 21498 SRR12995310 AMPLICON PRJNA666636 Saltmarsh 31.38892N 81.27632W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 39068150 SAMN16678307 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995310 21499 SRR12995311 AMPLICON PRJNA666636 Saltmarsh 31.38892N 81.27632W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 38612836 SAMN16678306 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995311 21503 SRR12995315 AMPLICON PRJNA666636 Saltmarsh 31.38943N 81.27757W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 43909940 SAMN16678302 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995315 21588 SRR12995407 AMPLICON PRJNA666636 Saltmarsh 31.38957N 81.27559W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 57162740 SAMN16678321 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995407 21591 SRR12995410 AMPLICON PRJNA666636 Saltmarsh 31.38904N 81.27569W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 45970650 SAMN16678318 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995410 20636 SRR13379980 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2016-08 Salt marsh sediment 14072914 SAMN17251800 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13379980 14917 SRR15928234 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2019/02/19 coral coral 165634114 SAMN21467047 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928234 21294 SRR1756720 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 9791850 SAMN03283752 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756720 21309 SRR1756869 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12263250 SAMN03283769 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756869 21311 SRR1756883 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 22924500 SAMN03283771 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756883 21312 SRR1756884 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 22432500 SAMN03283772 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756884 23978 SRR19242008 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-04 seagrass seawater 33420500 SAMN28462916 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242008 23987 SRR19242017 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-04 seagrass seawater 33664000 SAMN28462908 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242017 24003 SRR19242033 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 49070500 SAMN28462893 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242033 24006 SRR19242036 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51103500 SAMN28462890 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242036 24008 SRR19242038 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51804000 SAMN28462889 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242038 24009 SRR19242039 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51696500 SAMN28462888 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242039 24024 SRR19242054 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 49860000 SAMN28462874 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242054 24027 SRR19242057 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50421500 SAMN28462871 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242057 24028 SRR19242058 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50261000 SAMN28462870 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242058 24103 SRR23715689 AMPLICON PRJNA925291 Seagrass 33.065987 S 151.546528 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 99649697 SAMN33555433 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715689 24105 SRR23715691 AMPLICON PRJNA925291 Seagrass 33.066004 S 151.54654 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 114309420 SAMN33555435 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715691 24115 SRR23715701 AMPLICON PRJNA925291 Seagrass 33.063239 S 151.55989 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 102695768 SAMN33555421 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715701 24119 SRR23715705 AMPLICON PRJNA925291 Seagrass 33.063278 S 151.559906 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 66152674 SAMN33555425 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715705 24120 SRR23715706 AMPLICON PRJNA925291 Seagrass 33.060965 S 151.553237 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 99853895 SAMN33555426 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715706 24123 SRR23715709 AMPLICON PRJNA925291 Seagrass 33.061019 S 151.553192 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 122803968 SAMN33555429 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715709 24133 SRR23715719 AMPLICON PRJNA925291 Seagrass 33.060974 S 151.553245 E Australia: Myuna Bay 2020-09-09 Zostera muelleri Estuarine sediment 111556958 SAMN33555430 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23715719 24149 SRR23829604 AMPLICON PRJNA944167 Seagrass 1.74665 N 125.14956 E Indonesia: Bangka 2010-07 Syringodium isoetifolium plant 43353632 SAMN33739243 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829604 24180 SRR23829635 AMPLICON PRJNA944167 Seagrass 8.160796 S 115.024 E Indonesia: Bali 2011-06 Syringodium isoetifolium plant 22933190 SAMN33739219 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829635 24203 SRR23829658 AMPLICON PRJNA944167 Seagrass 5.33832 S 123.53486 E Indonesia: Wakatobi 2011-08 Syringodium isoetifolium plant 33300232 SAMN33739376 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829658 24251 SRR23829706 AMPLICON PRJNA944167 Seagrass 2.28151 N 118.24449 E Indonesia: Derawan 2010-06 Syringodium isoetifolium plant 31073434 SAMN33739271 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829706 24262 SRR23829717 AMPLICON PRJNA944167 Seagrass 2.55878 S 107.66886 E Indonesia: Belitung 2010-07 Syringodium isoetifolium plant 43348816 SAMN33739261 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829717 24309 SRR23829764 AMPLICON PRJNA944167 Seagrass 5.87927 S 110.43198 E Indonesia: Karimunjawa 2011-08 Syringodium isoetifolium plant 26928062 SAMN33739304 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829764 18236 SRR25047349 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 seawater seawater 69108396 SAMN36011519 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047349 18247 SRR25047360 AMPLICON PRJNA988256 Mangrove 1.3166 N 103.9834 E Singapore: Tanah Merah 2021/07/13 seawater seawater 62516496 SAMN36011734 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047360 18325 SRR25047438 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 plastic plastic 59777396 SAMN36011506 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047438 22695 SRR26898554 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 42138500 SAMN38338624 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898554 22705 SRR26898564 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 42323000 SAMN38338628 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898564 22706 SRR26898565 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass leaf 40566500 SAMN38338627 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898565 22708 SRR26898567 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass seagrass root 41750500 SAMN38338617 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898567 22722 SRR7130381 AMPLICON PRJNA315465 Seagrass 33.7144 S 151.2853 E Australia: Narrabeen lagoon 2014-05 seagrass rhizosphere 37757622 SAMN09062461 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7130381 22723 SRR7130382 AMPLICON PRJNA315465 Seagrass 33.7144 S 151.2853 E Australia: Narrabeen lagoon 2014-05 seagrass rhizosphere 53885593 SAMN09062459 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7130382 22724 SRR7130383 AMPLICON PRJNA315465 Seagrass 33.7144 S 151.2853 E Australia: Narrabeen lagoon 2014-05 seagrass rhizosphere 38321093 SAMN09062460 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7130383 22996 SRR7633193 AMPLICON PRJNA483963 Seagrass 32.66 N 117.15 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 24254828 SAMN09754516 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633193 23014 SRR7633211 AMPLICON PRJNA483963 Seagrass 32.68 N 117.22 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 21020408 SAMN09754526 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633211 21850 SRR7877543 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-07-18 Salt marsh sediment 48481784 SAMN10092077 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877543