# Export date: 2026-06-15 09:28:03 # Microbe: Cycloclasticus Cycloclasticus pugetii (ID: 9247) # Total amplicons: 55 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19485 ERR2508696 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 34025623 SAMEA1100003 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508696 22533 ERR3890608 AMPLICON PRJEB36104 Seagrass 38.380451 N 142.240387 E 2016-07-06 Zostera muelleri leaf 55533600 SAMEA6528919 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR3890608 23094 SRR10060483 AMPLICON PRJNA563200 Seagrass 32.17 S 115.73 E Australia: Cockburn Sound 2016-11 Posidonia australis Posidonia australis 73330800 SAMN12670151 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR10060483 19766 SRR10092898 AMPLICON PRJNA564581 Seaweed 36.05305556N 120.35944444E China 2017/09/03 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 14022369 SAMN12716425 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092898 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 20615 SRR12228797 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 78202500 SAMN10953564 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228797 20617 SRR12228800 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 236680000 SAMN10953561 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228800 20618 SRR12228803 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 36028000 SAMN10953560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228803 20619 SRR12228814 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 61578500 SAMN10953559 PAIRED Illumina MiSeq METAGENOMIC ITS https://www.ncbi.nlm.nih.gov/sra/SRR12228814 20620 SRR12228825 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 41594000 SAMN10953558 PAIRED Illumina MiSeq METAGENOMIC ITS https://www.ncbi.nlm.nih.gov/sra/SRR12228825 20623 SRR12228832 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 110630000 SAMN10953578 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228832 20624 SRR12228834 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 554476500 SAMN10953576 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228834 20629 SRR12228839 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 59373500 SAMN10953572 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228839 20630 SRR12228840 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 96120000 SAMN10953571 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228840 20633 SRR12228845 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 32079000 SAMN10953566 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228845 20634 SRR12228846 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 63238500 SAMN10953565 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228846 19295 SRR13741718 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/06 Laminaria setchellii algal material 73091339 SAMN16989069 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741718 21310 SRR1756870 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 10595250 SAMN03283770 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756870 21321 SRR1756940 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 10738800 SAMN03283781 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756940 24037 SRR19242067 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 48337000 SAMN28462862 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242067 24038 SRR19242068 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2020-11 seagrass seawater 49537000 SAMN28462861 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242068 18161 SRR25047274 AMPLICON PRJNA988256 Mangrove 1.2147 N 103.7586 E Singapore: Semakau 2021/08/25 seawater seawater 106918812 SAMN36011685 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047274 18162 SRR25047275 AMPLICON PRJNA988256 Mangrove 1.2147 N 103.7586 E Singapore: Semakau 2021/08/25 seawater seawater 69385316 SAMN36011684 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047275 18172 SRR25047285 AMPLICON PRJNA988256 Mangrove 1.2241 N 103.8507 E Singapore: St John's Island 2021/07/21 seawater seawater 54650764 SAMN36011675 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047285 18173 SRR25047286 AMPLICON PRJNA988256 Mangrove 1.2241 N 103.8507 E Singapore: St John's Island 2021/07/21 seawater seawater 51039366 SAMN36011674 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047286 18174 SRR25047287 AMPLICON PRJNA988256 Mangrove 1.2241 N 103.8507 E Singapore: St John's Island 2021/07/21 seawater seawater 60259598 SAMN36011673 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047287 18194 SRR25047307 AMPLICON PRJNA988256 Mangrove 1.2257 N 103.7464 E Singapore: Pulau Hantu Besar 2021/09/14 seawater seawater 59200680 SAMN36011590 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047307 18231 SRR25047344 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 plastic plastic 81949056 SAMN36011523 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047344 18238 SRR25047351 AMPLICON PRJNA988256 Mangrove 1.3102 N 103.9814 E Singapore: Tanah Merah 2021/07/19 seawater seawater 48960058 SAMN36011742 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047351 18240 SRR25047353 AMPLICON PRJNA988256 Mangrove 1.3102 N 103.9814 E Singapore: Tanah Merah 2021/07/19 seawater seawater 49094906 SAMN36011741 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047353 18241 SRR25047354 AMPLICON PRJNA988256 Mangrove 1.3102 N 103.9814 E Singapore: Tanah Merah 2021/07/19 seawater seawater 50448202 SAMN36011740 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047354 18260 SRR25047373 AMPLICON PRJNA988256 Mangrove 1.2160 N 103.8314 E Singapore: Small Sister's Island 2021/09/09 seawater seawater 62611612 SAMN36011722 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047373 18261 SRR25047374 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 sediment sediment 64930516 SAMN36011515 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047374 18288 SRR25047401 AMPLICON PRJNA988256 Mangrove 1.2153 N 103.7582 E Singapore: Semakau 2021/08/24 seawater seawater 65175530 SAMN36011697 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047401 18289 SRR25047402 AMPLICON PRJNA988256 Mangrove 1.2153 N 103.7582 E Singapore: Semakau 2021/08/24 seawater seawater 73516240 SAMN36011696 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047402 18329 SRR25047442 AMPLICON PRJNA988256 Mangrove 1.4101 N 103.9907 E Singapore: Pulau Ubin Chek Jawa 2021/07/15 seawater seawater 72386286 SAMN36011628 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047442 18330 SRR25047443 AMPLICON PRJNA988256 Mangrove 1.4101 N 103.9907 E Singapore: Pulau Ubin Chek Jawa 2021/07/15 seawater seawater 61729682 SAMN36011627 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047443 18331 SRR25047444 AMPLICON PRJNA988256 Mangrove 1.4101 N 103.9907 E Singapore: Pulau Ubin Chek Jawa 2021/07/15 seawater seawater 65149042 SAMN36011626 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047444 18384 SRR25047497 AMPLICON PRJNA988256 Mangrove 1.2256 N 103.8605 E Singapore: Kusu Island 2021/09/09 seawater seawater 60489562 SAMN36011546 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047497 18399 SRR25047512 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 seawater seawater 84103012 SAMN36011532 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047512 18401 SRR25047514 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 seawater seawater 58133334 SAMN36011531 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047514 18402 SRR25047515 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 seawater seawater 82010460 SAMN36011530 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047515 18403 SRR25047516 AMPLICON PRJNA988256 Mangrove 1.2592 N 103.7564 E Singapore: Cyrene Reef 2021/08/23 seawater seawater 58228450 SAMN36011529 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047516 18404 SRR25047517 AMPLICON PRJNA988256 Mangrove 1.2257 N 103.7464 E Singapore: Pulau Hantu Besar 2021/09/14 seawater seawater 71189510 SAMN36011592 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047517 22698 SRR26898557 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass coastal seawater 41972000 SAMN38338621 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898557 22700 SRR26898559 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass coastal seawater 42703000 SAMN38338619 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898559 22702 SRR26898561 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass coastal seawater 40218500 SAMN38338631 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898561 20040 SRR4105479 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 sediment 34190718 SAMN05521721 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105479 20041 SRR4105480 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 sediment 41399940 SAMN05521722 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105480 17314 SRR5319008 AMPLICON PRJNA351850 Mangrove 22.12 N 88.99 E India: West Bengal 2015/08/01 fresh water surface water 111864132 SAMN06448880 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319008 17315 SRR5319009 AMPLICON PRJNA351850 Mangrove 22.08 N 88.76 E India: West Bengal 2015/08/01 fresh water surface water 149019156 SAMN06448879 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319009 17316 SRR5319010 AMPLICON PRJNA351850 Mangrove 22.88 N 88.57 E India: West Bengal 2015/08/01 fresh water surface water 140330140 SAMN06448878 PAIRED Illumina HiSeq 2000 METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5319010 21934 SRR6398182 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38376009W USA 2013-07-07 Salt marsh sediment 7407912 SAMN08214150 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398182 22987 SRR7633184 AMPLICON PRJNA483963 Seagrass 32.66 N 117.15 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 26493252 SAMN09754509 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633184 22999 SRR7633196 AMPLICON PRJNA483963 Seagrass 32.66 N 117.15 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 24607564 SAMN09754519 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633196