# Export date: 2026-06-15 12:06:04 # Microbe: Salinisphaera Salinisphaera dokdonensis (ID: 9308) # Total amplicons: 22 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 21640 ERR12080747 AMPLICON PRJEB66381 Saltmarsh 53.75842165N 7.72091556E 2019-07-15 salt marsh sediment 36238259 SAMEA114446184 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080747 21641 ERR12080748 AMPLICON PRJEB66381 Saltmarsh 53.75874119N 7.71911983E 2019-07-15 salt marsh sediment 28738449 SAMEA114446185 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080748 21614 ERR12080757 AMPLICON PRJEB66381 Saltmarsh 53.75979908N 7.7155871E 2019-07-15 salt marsh sediment 36331976 SAMEA114446194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080757 21649 ERR12080759 AMPLICON PRJEB66381 Saltmarsh 53.75872608N 7.71908464E 2019-07-15 salt marsh sediment 35591525 SAMEA114446196 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR12080759 19727 SRR10092859 AMPLICON PRJNA564581 Seaweed 48.51472222N 1.96972222W France 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 571843 SAMN12716441 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092859 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 20616 SRR12228798 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 133311500 SAMN10953563 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228798 20617 SRR12228800 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 236680000 SAMN10953561 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228800 20622 SRR12228831 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus bulk soil 81997000 SAMN10953579 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228831 20623 SRR12228832 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 110630000 SAMN10953578 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228832 20624 SRR12228834 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 554476500 SAMN10953576 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228834 20625 SRR12228835 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 123993000 SAMN10953575 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228835 20630 SRR12228840 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 96120000 SAMN10953571 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228840 20631 SRR12228842 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 42956000 SAMN10953569 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228842 20633 SRR12228845 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 32079000 SAMN10953566 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228845 15648 SRR14741338 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 62944200 SAMN19580950 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741338 15652 SRR14741342 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 39249000 SAMN19580946 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741342 21696 SRR5360926 AMPLICON PRJNA379357 Saltmarsh 53.76261N 7.72296E Germany: Spiekeroog 2015 Salt marsh sediment 115640222 SAMN06606312 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360926 21911 SRR6398157 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38374W USA 2013-07-07 Salt marsh sediment 6993263 SAMN08214119 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398157 21873 SRR7877572 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-07-18 Salt marsh sediment 48691180 SAMN10092092 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877572