# Export date: 2026-06-15 12:35:52 # Microbe: Thalassolituus Thalassolituus oleivorans (ID: 9367) # Total amplicons: 63 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19450 ERR2508660 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 16398789 SAMEA1099953 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508660 19477 ERR2508687 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 20957133 SAMEA1099994 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508687 19478 ERR2508688 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 17813575 SAMEA1099995 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508688 19483 ERR2508694 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 5874475 SAMEA1100001 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508694 19484 ERR2508695 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 24065947 SAMEA1100002 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508695 19485 ERR2508696 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 34025623 SAMEA1100003 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508696 19509 ERR2508720 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 5843577 SAMEA1100027 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508720 19521 ERR2508732 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 29572297 SAMEA1100039 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508732 19522 ERR2508733 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 944756 SAMEA1100040 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508733 19523 ERR2508734 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 5842461 SAMEA1100041 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508734 19575 ERR2508787 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 32654357 SAMEA1100094 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508787 19576 ERR2508788 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 12390209 SAMEA1100095 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508788 19586 ERR2508798 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 5812613 SAMEA1100106 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508798 19601 ERR2508813 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 7458129 SAMEA1100121 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508813 21599 SRR10200273 AMPLICON PRJNA574840 Saltmarsh 29.895448N 88.82778W USA: Chandeleur Islands 2018-05-07 salt marsh sediment 57315000 SAMN12869853 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10200273 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 20617 SRR12228800 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 236680000 SAMN10953561 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228800 20618 SRR12228803 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 36028000 SAMN10953560 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228803 20629 SRR12228839 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 59373500 SAMN10953572 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228839 22403 SRR17216889 AMPLICON PRJNA788471 Saltmarsh 43.125N 70.868W USA: New Hampshire 2018-07 sediment 7885767 SAMN24002235 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR17216889 21299 SRR1756792 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 7095750 SAMN03283759 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756792 21315 SRR1756933 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12551850 SAMN03283775 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756933 21321 SRR1756940 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 10738800 SAMN03283781 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756940 21322 SRR1756941 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 7150500 SAMN03283782 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756941 21325 SRR1756944 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 16671450 SAMN03283785 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756944 21326 SRR1756945 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 14329950 SAMN03283786 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756945 21327 SRR1756946 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 15395850 SAMN03283787 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756946 21330 SRR1756950 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12849900 SAMN03283790 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756950 21333 SRR1756953 AMPLICON PRJNA272558 Saltmarsh 24.61N 118.06E China not collected Spartina alterniflora Rhizoplane 12138000 SAMN03283793 PAIRED Illumina HiSeq 2000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR1756953 24003 SRR19242033 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 49070500 SAMN28462893 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242033 24006 SRR19242036 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51103500 SAMN28462890 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242036 24021 SRR19242051 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 50144500 SAMN28462877 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242051 24026 SRR19242056 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50508000 SAMN28462872 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242056 24028 SRR19242058 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 50261000 SAMN28462870 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242058 22107 SRR23933937 AMPLICON PRJNA925448 Saltmarsh 41.2611N 72.5491W USA: Madison\, Connecticut marsh sediment 133105300 SAMN33188282 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933937 24355 SRR25047697 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 49961184 SAMN36015138 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047697 24358 SRR25047727 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 47502616 SAMN36015130 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047727 24359 SRR25047728 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 43480654 SAMN36015129 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047728 24361 SRR25047730 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 46129454 SAMN36015151 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047730 24363 SRR25047732 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere oxic area 24119130 SAMN36015150 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047732 24365 SRR25047734 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 65847964 SAMN36015148 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047734 24366 SRR25047735 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere oxic area 48288226 SAMN36015133 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047735 24369 SRR25047738 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere high hydrogen sulphide area 53916926 SAMN36015145 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047738 24371 SRR25047740 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 55562794 SAMN36015144 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047740 24372 SRR25047741 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 55459852 SAMN36015143 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047741 24373 SRR25047752 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 70207648 SAMN36015142 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047752 24376 SRR25047759 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere bulk sediment 63766248 SAMN36015172 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047759 24377 SRR25047760 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere bulk sediment 63720496 SAMN36015174 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047760 24384 SRR25047767 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-12-18 Zostera marina rhizosphere bulk sediment 39266654 SAMN36015167 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047767 24394 SRR25047777 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere bulk sediment 45472070 SAMN36015159 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047777 24395 SRR25047778 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere bulk sediment 42038864 SAMN36015158 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047778 24397 SRR25047780 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere high hydrogen sulphide area 61848276 SAMN36015134 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047780 24400 SRR25047783 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere high hydrogen sulphide area 38582180 SAMN36015154 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047783 21619 SRR26165203 AMPLICON PRJNA1019769 Saltmarsh USA:Delaware\,St Jones Reserve 2020 sediment 12152667 SAMN37494729 SINGLE Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR26165203 16567 SRR5725179 AMPLICON PRJNA390570 Mangrove 15.50 N 73.91 E India: Goa 2015/02/05 Mangrove soil 119168986 SAMN06675420 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5725179 17577 SRR5814393 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 65572619 SAMN07338415 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5814393 21740 SRR7877422 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 67701155 SAMN10092178 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877422 21765 SRR7877450 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 29090635 SAMN10092145 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877450 21823 SRR7877513 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 43387857 SAMN10092188 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877513 21830 SRR7877520 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 38179877 SAMN10092127 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877520 21854 SRR7877547 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 57071144 SAMN10092160 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877547 21856 SRR7877550 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 45932190 SAMN10092163 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877550