# Export date: 2026-06-14 20:11:16 # Microbe: Pseudomonas_B_650451 (ID: 9389) # Total amplicons: 50 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19772 SRR10092904 AMPLICON PRJNA564581 Seaweed 38.35277778N 141.05972222E Japan 2017/08/27 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 8510208 SAMN12716369 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092904 21148 SRR11233057 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9948W USA: Harwich\, MA Muddy Creek Marsh 2016-03-27 sediment 7162328 SAMN13950671 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233057 14922 SRR12400119 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 84499999 SAMN15718366 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400119 21462 SRR12995269 AMPLICON PRJNA666636 Saltmarsh 31.38983N 81.27757W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 45563528 SAMN16678244 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995269 15138 SRR14740825 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Fruit 42021600 SAMN19581181 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740825 15139 SRR14740826 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Fruit 36547800 SAMN19581180 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740826 15140 SRR14740827 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Fruit 42184800 SAMN19581179 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740827 15148 SRR14740835 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Fruit 50523000 SAMN19581172 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740835 15162 SRR14740849 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Leaf 35245200 SAMN19581160 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740849 15193 SRR14740880 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Fruit 98055600 SAMN19581132 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740880 15246 SRR14740933 AMPLICON PRJNA735404 Mangrove 1.438302 N 103.752878 E Malaysia: Kranji 2017/03/07 Sonneratia alba and Avicennia alba Fruit 58129200 SAMN19580886 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740933 15253 SRR14740940 AMPLICON PRJNA735404 Mangrove 5.534833 N 102.944331 E Malaysia: Merang 2017/03/07 Sonneratia alba and Avicennia alba Leaf 94122000 SAMN19581077 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14740940 15366 SRR14741053 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Fruit 34975200 SAMN19580975 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741053 15369 SRR14741056 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Fruit 39870600 SAMN19580973 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741056 15370 SRR14741057 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Fruit 64313400 SAMN19580972 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741057 15371 SRR14741058 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Fruit 62951400 SAMN19580971 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741058 15372 SRR14741059 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Fruit 48075600 SAMN19580970 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741059 15374 SRR14741061 AMPLICON PRJNA735404 Mangrove 1.445826 N 103.707778 E Malaysia: Lim Chu Kang 2017/03/07 Sonneratia alba and Avicennia alba Fruit 41026200 SAMN19580968 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741061 15418 SRR14741106 AMPLICON PRJNA735404 Mangrove 2.781230 N 104.206822 E Malaysia: Tioman 2017/03/07 Sonneratia alba and Avicennia alba Fruit 43044600 SAMN19581387 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741106 15423 SRR14741112 AMPLICON PRJNA735404 Mangrove 2.781230 N 104.206822 E Malaysia: Tioman 2017/03/07 Sonneratia alba and Avicennia alba Fruit 32981400 SAMN19581382 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741112 15446 SRR14741135 AMPLICON PRJNA735404 Mangrove 1.410703 N 103.991095 E Malaysia: Tioman 2017/03/07 Sonneratia alba and Avicennia alba Leaf 47131800 SAMN19581362 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741135 15685 SRR14741375 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Fruit 47461800 SAMN19581504 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741375 15689 SRR14741379 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Fruit 45573600 SAMN19581501 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741379 15692 SRR14741382 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Fruit 54348000 SAMN19581498 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741382 15710 SRR14741400 AMPLICON PRJNA735404 Mangrove 5.884847 N 102.481745 E Malaysia: Tok Bali 2017/03/07 Sonneratia alba and Avicennia alba Leaf 40076400 SAMN19581482 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741400 14989 SRR15566188 AMPLICON PRJNA756333 Mangrove Malaysia:MRE 2025/12/19 Mangrove sediment 37752624 SAMN20864013 PAIRED Illumina HiSeq 2500 GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15566188 14816 SRR15928133 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 72670407 SAMN21467036 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928133 14851 SRR15928168 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 50807477 SAMN21467004 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928168 14856 SRR15928173 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 93732550 SAMN21466999 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928173 14861 SRR15928178 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 94374990 SAMN21466995 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928178 14876 SRR15928193 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 36131503 SAMN21466981 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928193 14891 SRR15928208 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 94281672 SAMN21466967 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928208 14903 SRR15928220 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2019/02/19 coral coral 56412365 SAMN21467060 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928220 14904 SRR15928221 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2019/02/19 coral coral 170200372 SAMN21467059 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928221 17769 SRR21291240 AMPLICON PRJNA874590 Mangrove 14.60000278N 61.01000000 W Martinique:Cohe du Lamentin 2025/06/18 Mangrove sediment 12264438 SAMN30556387 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR21291240 18169 SRR25047282 AMPLICON PRJNA988256 Mangrove 1.2147 N 103.7586 E Singapore: Semakau 2021/08/25 plastic plastic 86849336 SAMN36011678 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047282 18248 SRR25047361 AMPLICON PRJNA988256 Mangrove 1.3166 N 103.9834 E Singapore: Tanah Merah 2021/07/13 seawater seawater 55111896 SAMN36011733 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047361 18296 SRR25047409 AMPLICON PRJNA988256 Mangrove 1.2153 N 103.7582 E Singapore: Semakau 2021/08/24 plastic plastic 94828244 SAMN36011691 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047409 18362 SRR25047475 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 plastic plastic 79446542 SAMN36011598 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047475 18367 SRR25047480 AMPLICON PRJNA988256 Mangrove 1.3802 N 103.9486 E Singapore: Pasir Ris Park 2021/08/13 plastic plastic 64213534 SAMN36011593 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047480 18489 SRR27644582 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/21 Mangrove soil 15039902 SAMN39505387 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644582 20514 SRR27942830 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Nemalion vermiculare host associated 17898160 SAMN39854492 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942830 16835 SRR28031515 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 50093700 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031515 16836 SRR28031516 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 50093700 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031516 16839 SRR28031519 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 48932700 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031519 16842 SRR28031522 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 48932700 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031522 17790 SRR4858369 AMPLICON PRJNA351850 Mangrove 21.67 N 88.15 E India:West Bengal'' 2014/07/25 bacterioplankton Mooriganga estuary in Sundarbans mangrove ecoregion 561760176 SAMN05954869 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4858369 20399 SRR740788 AMPLICON PRJNA189174 Seaweed 8.466667N 77.683333E India: Karankadu coastal region\, Palk Bay 2011/08/01 256062900 SAMN01919424 PAIRED Illumina Genome Analyzer IIx METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR740788 16623 SRR9593087 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 85553827 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593087 16626 SRR9593090 AMPLICON PRJNA550512 Mangrove 6.8552222 N 100.95597 E Thailand 2017/12/04 Mud estuarine mud 83283018 SAMN12124986 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593090