# Export date: 2026-06-14 20:11:16 # Microbe: Pseudomonas_D_641484 Pseudomonas_D_641484 neustonica (ID: 9395) # Total amplicons: 33 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22444 DRR403356 AMPLICON PRJDB14309 Seagrass 35.315753 N 139.789322 E Japan:Chiba\, Futsu 2019-07-04 seagrass Seagrass leaf 76077581 SAMD00532442 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/DRR403356 19532 ERR2508744 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 10915615 SAMEA1100051 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508744 19781 SRR10092913 AMPLICON PRJNA564581 Seaweed 43.04777778N 144.94972222E Japan 2016/09/15 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 35991765 SAMN12716386 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092913 21603 SRR10200288 AMPLICON PRJNA574840 Saltmarsh 29.895448N 88.82778W USA: Chandeleur Islands 2018-05-07 salt marsh sediment 98268000 SAMN12869917 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10200288 20626 SRR12228836 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 206085000 SAMN10953557 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228836 19219 SRR13741158 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/06 Seawater 41727349 SAMN16984767 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741158 19220 SRR13741159 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/06 Seawater 65834968 SAMN16984766 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741159 19222 SRR13741161 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/06 Seawater 47446325 SAMN16984764 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741161 19226 SRR13741165 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/08 Seawater 28816854 SAMN16984782 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741165 19227 SRR13741166 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/08 Seawater 24042537 SAMN16984781 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741166 19229 SRR13741168 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/08 Seawater 25603256 SAMN16984779 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741168 19230 SRR13741169 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/08 Seawater 37951081 SAMN16984778 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741169 24360 SRR25047729 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 35112252 SAMN36015152 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047729 24401 SRR25047784 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 37351692 SAMN36015153 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047784 20032 SRR4105465 AMPLICON PRJNA338162 Seaweed 23.487N 117.0939E China:Guangdong\, Shantou\, Nan'ao 2014/04/15 water 48452036 SAMN05521713 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR4105465 21683 SRR5360911 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72294E Germany: Spiekeroog 2015 Salt marsh sediment 183951321 SAMN06606327 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360911 21689 SRR5360917 AMPLICON PRJNA379357 Saltmarsh 53.76209N 7.72326E Germany: Spiekeroog 2015 Salt marsh sediment 140942500 SAMN06606321 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360917 21691 SRR5360920 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2015 Salt marsh sediment 131437922 SAMN06606318 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360920 21694 SRR5360923 AMPLICON PRJNA379357 Saltmarsh 53.76266N 7.7225E Germany: Spiekeroog 2015 Salt marsh sediment 162747816 SAMN06606315 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360923 21702 SRR5360932 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72346E Germany: Spiekeroog 2015 Salt marsh sediment 123253015 SAMN06606306 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360932 21711 SRR5360941 AMPLICON PRJNA379357 Saltmarsh 53.76219N 7.72282E Germany: Spiekeroog 2014 Salt marsh sediment 76814122 SAMN06606297 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360941 21713 SRR5360943 AMPLICON PRJNA379357 Saltmarsh 53.7626N 7.72312E Germany: Spiekeroog 2014 Salt marsh sediment 89615105 SAMN06606295 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360943 21716 SRR5360946 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72346E Germany: Spiekeroog 2014 Salt marsh sediment 35939162 SAMN06606292 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360946 21718 SRR5360949 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2014 Salt marsh sediment 97142823 SAMN06606289 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360949 21721 SRR5360952 AMPLICON PRJNA379357 Saltmarsh 53.76267N 7.72239E Germany: Spiekeroog 2014 Salt marsh sediment 74715789 SAMN06606286 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360952 21724 SRR5360955 AMPLICON PRJNA379357 Saltmarsh 53.76266N 7.7225E Germany: Spiekeroog 2014 Salt marsh sediment 89447558 SAMN06606283 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360955 21949 SRR5486563 AMPLICON PRJNA384656 Saltmarsh 32.5576N 80.4365W USA:South Carolina\,ACE Basin Wildlife Refuge 2010-10-10 salt marsh tidal mudflat 73116802 SAMN06843733 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486563 21950 SRR5486565 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 49406840 SAMN06843731 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486565 21975 SRR5486595 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 69924584 SAMN06843701 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486595 21976 SRR5486596 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 78192022 SAMN06843700 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486596 21982 SRR5486602 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 30327326 SAMN06843694 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486602 22905 SRR6424046 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914462 E Taiwan 2014-01-10 seagrass root 73679382 SAMN08222575 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424046 22913 SRR6424054 AMPLICON PRJNA427074 Seagrass 24.778918 N 120.914464 E Taiwan 2014-01-10 seagrass rhizosphere 46673662 SAMN08222577 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR6424054