# Export date: 2026-06-15 11:42:26 # Microbe: Thiohalomonas Thiohalomonas nitratireducens (ID: 9532) # Total amplicons: 57 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22587 ERR7421929 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 25729454 SAMEA11293306 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421929 22611 ERR7421953 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 22528514 SAMEA11293330 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421953 22627 ERR7421969 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 23498685 SAMEA11293346 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421969 22635 ERR7421977 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 21963068 SAMEA11293354 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421977 22651 ERR7421993 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 18381290 SAMEA11293370 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421993 22655 ERR7421997 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 26760940 SAMEA11293374 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421997 23652 SRR12086839 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 334669348 SAMN15364572 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086839 23654 SRR12086841 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 281011515 SAMN15364570 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086841 23660 SRR12086847 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 367184384 SAMN15364569 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086847 23661 SRR12086848 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 575337245 SAMN15364568 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086848 21424 SRR12995225 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.0309W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 42564078 SAMN16678411 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995225 21453 SRR12995258 AMPLICON PRJNA666636 Saltmarsh 31.38957N 81.27559W USA: Georgia 2018-07-10 Sporobolus alterniflorus plant 44512340 SAMN16678254 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995258 21517 SRR12995332 AMPLICON PRJNA666636 Saltmarsh 31.9728N 81.0309W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 42200128 SAMN16678389 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995332 21556 SRR12995372 AMPLICON PRJNA666636 Saltmarsh 31.97528N 81.03122W USA: Georgia 2019-07-22 Sporobolus alterniflorus sediment 46863206 SAMN16678352 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995372 21592 SRR12995411 AMPLICON PRJNA666636 Saltmarsh 31.38957N 81.27657W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 44099194 SAMN16678317 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995411 17715 SRR14181396 AMPLICON PRJNA720541 Mangrove 22.3404 N 39.0896 E Saudi Arabia:Thuwal 2018/10/01 Mangrove sediment/soil 56164916 SAMN18661255 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181396 17639 SRR14181403 AMPLICON PRJNA720541 Mangrove 22.3404 N 39.0896 E Saudi Arabia:Thuwal 2018/10/01 Mangrove sediment/soil 78056270 SAMN18661247 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181403 17640 SRR14181404 AMPLICON PRJNA720541 Mangrove 22.3404 N 39.0896 E Saudi Arabia:Thuwal 2018/10/01 Mangrove sediment/soil 68748402 SAMN18661247 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181404 17641 SRR14181405 AMPLICON PRJNA720541 Mangrove 22.3404 N 39.0896 E Saudi Arabia:Thuwal 2018/10/01 Mangrove sediment/soil 58252374 SAMN18661247 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181405 17649 SRR14181415 AMPLICON PRJNA720541 Mangrove 22.3404 N 39.0896 E Saudi Arabia:Thuwal 2018/10/01 Mangrove sediment/soil 90301776 SAMN18661247 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14181415 19000 SRR17136216 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/10/01 Avicennia marina sediment/soil 51975094 SAMN23668678 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136216 18743 SRR17136222 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/12/16 Avicennia marina sediment/soil 78056270 SAMN23668672 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136222 19021 SRR17136251 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/12/16 Avicennia marina sediment/soil 58252374 SAMN23668672 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136251 19027 SRR17136261 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/12/16 Avicennia marina sediment/soil 90301776 SAMN23668672 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136261 19029 SRR17136263 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/12/16 Avicennia marina sediment/soil 68748402 SAMN23668672 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136263 19031 SRR17136265 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/10/01 Avicennia marina sediment/soil 49330676 SAMN23668676 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136265 19032 SRR17136266 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/10/01 Avicennia marina sediment/soil 45445403 SAMN23668676 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136266 19041 SRR17136275 AMPLICON PRJNA786350 Mangrove 22.3270 N 39.0919 E Saudi Arabia:Thuwal 2018/12/16 Avicennia marina sediment/soil 56164916 SAMN23668674 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17136275 18955 SRR18327474 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/16 Mangrove sediment 14249483 SAMN26511687 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18327474 18970 SRR18327489 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/16 Mangrove sediment 30320059 SAMN26511695 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18327489 18975 SRR18327494 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/16 Mangrove sediment 15817388 SAMN26511682 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18327494 18939 SRR18330218 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/17 Mangrove sediment 23092934 SAMN26511726 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18330218 17957 SRR18808570 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/02/17 Mangrove sediment 34266329 SAMN26511765 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18808570 16908 SRR19251810 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 64733746 SAMN26511810 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251810 16912 SRR19251814 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 47573409 SAMN26511806 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251814 16915 SRR19251817 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 42312539 SAMN26511803 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251817 16926 SRR19251828 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 119434839 SAMN26511793 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251828 16928 SRR19251830 AMPLICON PRJNA813530 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove sediment 143591041 SAMN26511791 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR19251830 22001 SRR5486624 AMPLICON PRJNA384656 Saltmarsh 41.6249N 71.3228W USA:Rhode Island\,Prudence Island 2010-10-25 salt marsh tidal mudflat 83833498 SAMN06843672 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486624 16455 SRR5886376 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 129118436 SAMN06834622 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886376 16457 SRR5886378 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 98531427 SAMN06834620 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886378 16538 SRR5886460 AMPLICON PRJNA339628 Mangrove 22.20 N 39.5 E Saudi Arabia: KAUST 2025/03/16 Mangrove Sediment 81902324 SAMN06834506 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5886460 17457 SRR7585584 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 47573409 SAMN09700206 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585584 17462 SRR7585589 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 42312539 SAMN09700201 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585589 17486 SRR7585613 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 64733746 SAMN09700212 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585613 17496 SRR7585623 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/16 Mangrove Sediment 30320059 SAMN09699977 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585623 17508 SRR7585635 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/02/17 Mangrove Sediment 32909955 SAMN09700126 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585635 17548 SRR7585675 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 143591041 SAMN09700175 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585675 17557 SRR7585684 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/05/17 Mangrove Sediment 119434839 SAMN09700179 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585684 15921 SRR7585746 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/17 Mangrove Sediment 23092934 SAMN09700048 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585746 15951 SRR7585776 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/02/17 Mangrove Sediment 34266329 SAMN09700117 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585776 16025 SRR7585850 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/16 Mangrove Sediment 15817388 SAMN09699931 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585850 16030 SRR7585855 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/08/16 Mangrove Sediment 14249483 SAMN09699936 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585855 16941 SRR8157619 AMPLICON PRJNA503486 Mangrove 11.4195 N 73.1027 W Colombia: Guajira 2017/04/25 Mangrove mangrove soil 52661756 SAMN10361672 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR8157619