# Export date: 2026-06-15 15:50:04 # Microbe: Stenotrophomonas_A_615274 Stenotrophomonas_A_615274 rhizophila (ID: 9617) # Total amplicons: 38 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19433 ERR2508643 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 16623096 SAMEA1099931 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508643 19442 ERR2508652 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 16824492 SAMEA1099945 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508652 19449 ERR2508659 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 14044219 SAMEA1099952 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508659 19456 ERR2508666 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 25995580 SAMEA1099959 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508666 19503 ERR2508714 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 17445363 SAMEA1100021 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508714 19505 ERR2508716 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 17322931 SAMEA1100023 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508716 19507 ERR2508718 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 20277845 SAMEA1100025 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508718 19508 ERR2508719 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 18200728 SAMEA1100026 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508719 19520 ERR2508731 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 18126191 SAMEA1100038 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508731 19527 ERR2508738 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 16322188 SAMEA1100045 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508738 19529 ERR2508740 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 19386271 SAMEA1100047 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508740 19545 ERR2508757 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 14320294 SAMEA1100064 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508757 19563 ERR2508775 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 14768988 SAMEA1100082 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508775 19581 ERR2508793 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 8515217 SAMEA1100100 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508793 19609 ERR2508821 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 13416722 SAMEA1100130 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508821 19613 ERR2508825 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 8852085 SAMEA1100134 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508825 19668 SRR10092800 AMPLICON PRJNA564581 Seaweed 38.35277778N 141.05972222E Japan 2017/08/27 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 8017422 SAMN12716367 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092800 20904 SRR12852712 AMPLICON PRJNA670253 Saltmarsh 30.3778N 87.83778W USA: Weeks Bay\, AL 2018-06-18 sediment 69444061 SAMN16490920 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852712 14997 SRR13291653 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 33813618 SAMN17075149 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291653 14999 SRR13291656 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 37948610 SAMN17075146 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291656 15001 SRR13291658 AMPLICON PRJNA685020 Mangrove 21.510783 N 110.010353 E China: Maoming 2019/04/25 Mangrove mangrove root 32674926 SAMN17075144 PAIRED Illumina HiSeq 2500 GENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR13291658 14839 SRR15928156 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/08/21 coral coral 98617934 SAMN21467015 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928156 14840 SRR15928157 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/08/21 coral coral 50948760 SAMN21467014 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928157 14856 SRR15928173 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 93732550 SAMN21466999 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928173 17849 SRR17658366 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 31426026 SAMN25078392 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658366 18118 SRR25728348 AMPLICON PRJNA1007244 Mangrove 20.244806S 106.572972 E Viet Nam: Nam Dinh 2025/04/19 Kandelia obovata estuarine mud 35779870 SAMN37055105 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR25728348 16856 SRR26222187 AMPLICON PRJNA1021532 Mangrove 15.2958 N 73.4911 E India 2020/08/05 Mangrove mangrove sediment 1049480500 SAMN37558048 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR26222187 18449 SRR27644542 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/23 Mangrove soil 9500014 SAMN39505451 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644542 20515 SRR27942831 AMPLICON PRJNA1074237 Seaweed 33.056N 35.1019E Israel: Achziv littoral 2022/05/26 Sarconema sp. host associated 18288760 SAMN39854491 PAIRED Illumina MiniSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27942831 21685 SRR5360913 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 150026186 SAMN06606325 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360913 15847 SRR5814384 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 41917993 SAMN07338368 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814384 17574 SRR5814385 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 47985687 SAMN07338367 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5814385 15856 SRR5814398 AMPLICON PRJNA393594 Mangrove 25.15 N 121.43 E Taiwan: Tamsui\, Taipei 2025/01/16 Mangrove soil 49235033 SAMN07338370 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR5814398 21053 SRR8931061 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:00:00Z soil 23101600 SAMN11465915 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931061 21056 SRR8931064 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:10:00Z soil 23228396 SAMN11465917 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931064 21057 SRR8931065 AMPLICON PRJNA533745 Saltmarsh 45.75N 122.45E China: Momoge wetland 2017-12-13T10:05:00Z soil 24812258 SAMN11465916 PAIRED Illumina HiSeq 2000 GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931065