# Export date: 2026-06-15 15:50:05 # Microbe: Xanthomonas_A_614439 (ID: 9625) # Total amplicons: 31 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19572 ERR2508784 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 9719213 SAMEA1100091 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508784 19588 ERR2508800 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 7725227 SAMEA1100108 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508800 19596 ERR2508808 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 9153957 SAMEA1100116 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508808 19600 ERR2508812 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 2827097 SAMEA1100120 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508812 20558 SRR12125031 AMPLICON PRJNA643437 Saltmarsh 41.5758N 70.6394W USA: Little Sippewissett Salt Marsh\, Falmouth\, MA 2018-09-30 Salt marsh sediment 42043493 SAMN15414948 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12125031 14922 SRR12400119 AMPLICON PRJNA650560 Mangrove 13.74293 S 39.05851 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 84499999 SAMN15718366 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400119 14926 SRR12400123 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 91406705 SAMN15718362 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400123 14928 SRR12400125 AMPLICON PRJNA650560 Mangrove 13.83692 S 39.33435 W Brazil: Juliana River basin 2025/02/20 Mangrove mangrove sediment 97654572 SAMN15718360 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12400125 19394 SRR13741817 AMPLICON PRJNA682229 Seaweed 51.666N 128.135W Canada: British Columbia 2016/06/07 Laminaria setchellii algal material 73388428 SAMN16989003 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13741817 15437 SRR14741126 AMPLICON PRJNA735404 Mangrove 2.781230 N 104.206822 E Malaysia: Tioman 2017/03/07 Sonneratia alba and Avicennia alba Pneumatophore 44118000 SAMN19581369 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR14741126 14818 SRR15928135 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 23758530 SAMN21467034 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928135 14880 SRR15928197 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 48036503 SAMN21466977 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928197 18891 SRR18349716 AMPLICON PRJNA817083 Mangrove 25.42 N 67.1 E Pakistan: Lasbela 2019/11/16 Mangrove mangrove sediments 125618463 SAMN26747206 PAIRED Illumina HiSeq 2500 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR18349716 19043 SRR19454846 AMPLICON PRJNA844062 Mangrove 26.833536N 82.264662 W USA:Florida 2019/11/29 Mangrove Viviparous Propagules (Fruits) of Red Mangroves Rhizophora mangle) 237410585 SAMN28780356 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR19454846 17737 SRR21290766 AMPLICON PRJNA874575 Mangrove 14.6000027N 61.01000000 W Martinique:Cohe du Lamentin 2025/06/18 Mangrove sediment 6813368 SAMN30553763 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR21290766 17738 SRR21290767 AMPLICON PRJNA874575 Mangrove 14.56N 61.01000000 W Martinique:Pointe Merle 2025/06/18 Mangrove sediment 12889206 SAMN30553762 PAIRED Illumina MiSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR21290767 24182 SRR23829637 AMPLICON PRJNA944167 Seagrass 8.26874 S 124.40135 E Indonesia: Alor 2011-06 Syringodium isoetifolium plant 31227546 SAMN33739191 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829637 22694 SRR26898553 AMPLICON PRJNA1042847 Seagrass NA China: Qinhuangdao 2022-09 seagrass coastal sediment 40784000 SAMN38338625 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR26898553 22181 SRR27176358 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 39685216 SAMN38763888 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176358 18454 SRR27644547 AMPLICON PRJNA1066794 Mangrove 21.44 S 144.35 E Australia:Exmouth Gulf 2022/08/24 Mangrove soil 3529474 SAMN39505447 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR27644547 16833 SRR28031513 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 36069900 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031513 16835 SRR28031515 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 50093700 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031515 16836 SRR28031516 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Alwajh 2022/12/03 Avicennia marina Rizospher soil 50093700 SAMN39961993 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031516 16837 SRR28031517 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 46390800 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031517 16842 SRR28031522 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 48932700 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031522 16850 SRR28031530 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 28254900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031530 16851 SRR28031531 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 45090900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031531 16852 SRR28031532 AMPLICON PRJNA1077244 Mangrove 24.803064 N 37.180672 E Saudi Arabia: Umlij 2022/12/03 Avicennia marina Rizospher soil 45090900 SAMN39961992 PAIRED DNBSEQ-G400 METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR28031532 22345 SRR28821032 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-14 salt marsh soil 258195994 SAMN41100808 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821032 21925 SRR6398172 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.383766W USA 2013-07-07 Salt marsh sediment 6144654 SAMN08214129 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398172 21937 SRR6398185 AMPLICON PRJNA423244 Saltmarsh 41.35177N 70.38376004W USA 2013-07-07 Salt marsh sediment 6797931 SAMN08214145 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR6398185