# Export date: 2026-06-15 10:09:31 # Microbe: Mariprofundus Mariprofundus ferrooxydans (ID: 9633) # Total amplicons: 48 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19435 ERR2508645 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 20100234 SAMEA1099933 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508645 19534 ERR2508746 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 14921435 SAMEA1100053 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508746 19656 SRR10092788 AMPLICON PRJNA564581 Seaweed 43.04777778N 144.94972222E Japan 2017/08/31 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 20440473 SAMN12716381 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092788 19657 SRR10092789 AMPLICON PRJNA564581 Seaweed 43.04777778N 144.94972222E Japan 2017/08/31 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 30543942 SAMN12716380 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092789 19682 SRR10092814 AMPLICON PRJNA564581 Seaweed 37.920179N 122.671616W USA 2017/09/21 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 18858564 SAMN12716525 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092814 19762 SRR10092894 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 1457415 SAMN12716486 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092894 19787 SRR10092919 AMPLICON PRJNA564581 Seaweed 43.04777778N 144.94972222E Japan 2016/09/15 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 36648932 SAMN12716374 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092919 19835 SRR10092967 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 1639442 SAMN12716485 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092967 19836 SRR10092968 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum saline water 1940158 SAMN12716484 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092968 19838 SRR10092970 AMPLICON PRJNA564581 Seaweed 54.36388889N 10.19361111E Germany 2017/09/13 Gracilaria vermiculophylla/Agarophyton vermiculophyllum alga surface 15970720 SAMN12716479 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR10092970 20851 SRR11233100 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9948W USA: Harwich\, MA Muddy Creek Marsh 2017-06 sediment 55472641 SAMN13950545 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233100 21395 SRR11233179 AMPLICON PRJNA602775 Saltmarsh 41.7119N 69.9948W USA: Harwich\, MA Muddy Creek Marsh 2015-08-19 sediment 9976964 SAMN13950710 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233179 21176 SRR11233183 AMPLICON PRJNA602775 Saltmarsh 41.776N 69.9412W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2015-08-26 sediment 9299015 SAMN13950707 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233183 20887 SRR11233230 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9694W USA: Orleans\, MA marsh off of Crows Landing 2017-06 sediment 24016257 SAMN13950489 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233230 21197 SRR11233245 AMPLICON PRJNA602775 Saltmarsh 41.7399N 69.9688W USA: Orleans\, MA marsh off of Crows Landing 2017-07 sediment 13336832 SAMN13950484 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233245 20897 SRR11233255 AMPLICON PRJNA602775 Saltmarsh 41.7757N 69.9414W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2017-06 sediment 17475810 SAMN13950634 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233255 21403 SRR11233262 AMPLICON PRJNA602775 Saltmarsh 41.7758N 69.9413W USA: Orleans\, MA marsh at end of Sparrowhawk Road 2016-07-26 sediment 8726700 SAMN13950628 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233262 23651 SRR12086838 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 341598586 SAMN15364573 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086838 23653 SRR12086840 AMPLICON PRJNA641753 Seagrass 37.85 N 119.1 E China:Dongying 2019-06 Zostera japonica sediment 298045658 SAMN15364571 PAIRED Illumina MiniSeq GENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR12086840 20680 SRR13380031 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-05 Salt marsh sediment 35321681 SAMN17251816 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380031 22061 SRR22025471 AMPLICON PRJNA893704 Saltmarsh 38.74644N 76.36811W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 63737532 SAMN31431862 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025471 22107 SRR23933937 AMPLICON PRJNA925448 Saltmarsh 41.2611N 72.5491W USA: Madison\, Connecticut marsh sediment 133105300 SAMN33188282 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933937 24360 SRR25047729 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 35112252 SAMN36015152 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047729 24361 SRR25047730 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor Zostera marina rhizosphere oxic area 46129454 SAMN36015151 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047730 24365 SRR25047734 AMPLICON PRJNA988287 Seagrass 56.05811111 N 12.57797222 E Denmark: coastal site near Elsinor 2019-10-31 Zostera marina rhizosphere bulk sediment 65847964 SAMN36015148 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR25047734 21999 SRR5486622 AMPLICON PRJNA384656 Saltmarsh 41.6249N 71.3228W USA:Rhode Island\,Prudence Island 2010-10-25 salt marsh tidal mudflat 69356822 SAMN06843674 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486622 22002 SRR5486625 AMPLICON PRJNA384656 Saltmarsh 41.6249N 71.3228W USA:Rhode Island\,Prudence Island 2010-10-25 salt marsh tidal mudflat 75142874 SAMN06843671 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486625 22023 SRR5486646 AMPLICON PRJNA384656 Saltmarsh 41.5806N 70.5198W USA:Massachusetts\,Waquoit Bay 2010-10-19 salt marsh tidal mudflat 49753722 SAMN06843649 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486646 21739 SRR7877421 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 41888011 SAMN10092179 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877421 21760 SRR7877445 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 36114467 SAMN10092140 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877445 21810 SRR7877500 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 48557686 SAMN10092136 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877500 21817 SRR7877507 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 47486309 SAMN10092184 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877507 21819 SRR7877509 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 60982455 SAMN10092182 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877509 21826 SRR7877516 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 38924075 SAMN10092129 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877516 21829 SRR7877519 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 41250564 SAMN10092126 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877519 21834 SRR7877524 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 42986108 SAMN10092123 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877524 21838 SRR7877530 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-11-07 Salt marsh sediment 57973822 SAMN10092196 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877530 21845 SRR7877538 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-07-18 Salt marsh sediment 45190146 SAMN10092070 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877538 21849 SRR7877542 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-07-18 Salt marsh sediment 51250876 SAMN10092074 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877542 21852 SRR7877545 AMPLICON PRJNA491859 Saltmarsh 42.0387N 70.2048W USA: West End Marsh\, Provincetown\, Massachusetts 2016-07-18 Salt marsh sediment 40621130 SAMN10092079 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877545 21855 SRR7877549 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 59906591 SAMN10092162 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877549 21858 SRR7877552 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 44707656 SAMN10092165 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877552 21039 SRR8207357 AMPLICON PRJNA505917 Saltmarsh 42.76N 70.89W USA: Plum Island Estuary 2016-03-09 Spartina alterniflora sediment 25295564 SAMN10439470 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8207357 21097 SRR8931851 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 39815628 SAMN11463476 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931851 21126 SRR8931885 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 30892578 SAMN11463481 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931885 21129 SRR8931888 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 8287016 SAMN11463528 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931888 20900 SRR9597789 AMPLICON PRJNA551237 Saltmarsh 40.618433N 73.834383W USA:New York\,Jamaica Bay 2015-07 Salt marsh sediment 1724128352 SAMN12142399 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR9597789