# Export date: 2026-06-15 10:34:12 # Microbe: Victivallis (ID: 9659) # Total amplicons: 48 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 22606 ERR7421948 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 21970781 SAMEA11293325 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421948 22637 ERR7421979 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 25899252 SAMEA11293356 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7421979 22667 ERR7422009 AMPLICON PRJEB48899 Seagrass NA Cymodocea nodosa sediment 19849791 SAMEA11293386 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR7422009 21611 SRR11772251 AMPLICON PRJNA631747 Saltmarsh 42.78594979N 70.83731232W USA 2016 Sporobolus alterniflorus sediment 5081028422 SAMN14891083 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR11772251 20629 SRR12228839 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus x townsendii rhizosphere 59373500 SAMN10953572 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228839 14929 SRR12708809 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 17029000 SAMN16261220 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708809 14930 SRR12708810 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 20879500 SAMN16261219 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708810 14932 SRR12708812 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 21032000 SAMN16261216 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708812 14933 SRR12708813 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 24180000 SAMN16261215 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708813 14934 SRR12708814 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 16683500 SAMN16261214 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708814 14935 SRR12708815 AMPLICON PRJNA665549 Mangrove 4.93159 N 52.30169 W French Guiana 1905/07/06 Mangrove/bioanode mangrove sediment 25411000 SAMN16261213 SINGLE Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR12708815 21206 SRR12852713 AMPLICON PRJNA670253 Saltmarsh 30.3778N 87.83778W USA: Weeks Bay\, AL 2018-06-18 sediment 90669267 SAMN16490919 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852713 20942 SRR12852794 AMPLICON PRJNA670253 Saltmarsh 32.751719N 79.897581W USA: Charleston\, SC 2018-06-25 sediment 83490883 SAMN16490846 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852794 21413 SRR12995212 AMPLICON PRJNA666636 Saltmarsh 31.38914N 81.27642W USA: Georgia 2019-07-08 Sporobolus alterniflorus plant 43984738 SAMN16678312 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995212 21523 SRR12995338 AMPLICON PRJNA666636 Saltmarsh 31.97367N 81.03113W USA: Georgia 2019-07-22 Sporobolus alterniflorus plant 43740766 SAMN16678383 PAIRED Illumina MiSeq OTHER 16s https://www.ncbi.nlm.nih.gov/sra/SRR12995338 20735 SRR13380095 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2016-07 Salt marsh sediment 11478163 SAMN17251938 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380095 23733 SRR15068643 AMPLICON PRJNA744715 Seagrass 37.2 N 122.34 E China:Weihai 2019-06 Zostera marina sediment 254529146 SAMN20115041 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR15068643 24079 SRR19536323 AMPLICON PRJNA845084 Seagrass 35.47 S 138.29 E Australia: Lady bay\, South Australia 2019 Posidonia angustifolia fruit 20370477 SAMN28854762 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19536323 22051 SRR22025460 AMPLICON PRJNA893704 Saltmarsh 38.75742N 76.3789W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 77126328 SAMN31431872 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025460 22071 SRR22025482 AMPLICON PRJNA893704 Saltmarsh 38.7613N 76.38105W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 59434136 SAMN31431852 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025482 22077 SRR22025488 AMPLICON PRJNA893704 Saltmarsh 38.77305N 76.37801W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 64366788 SAMN31431846 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025488 22082 SRR22025493 AMPLICON PRJNA893704 Saltmarsh 38.77305N 76.37802W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 57629974 SAMN31431842 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025493 17672 SRR23961222 AMPLICON PRJNA774281 Mangrove 25.1005098 N 80.43914361 W USA: Florida Keys\, Florida 1905/07/06 Mangrove plant matter 43825493 SAMN33844850 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23961222 17675 SRR23961225 AMPLICON PRJNA774281 Mangrove 25.10140942 N 80.43864199 W USA: Florida Keys\, Florida 1905/07/06 Mangrove plant matter 43636629 SAMN33844849 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23961225 17682 SRR23961232 AMPLICON PRJNA774281 Mangrove 25.1005098 N 80.43914361 W USA: Florida Keys\, Florida 1905/07/06 Mangrove plant matter 37386013 SAMN33844851 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR23961232 22181 SRR27176358 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 39685216 SAMN38763888 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176358 22185 SRR27176362 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal typha marsh soil 44782674 SAMN38763884 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176362 22218 SRR27176397 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 45270102 SAMN38763925 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176397 22231 SRR27176411 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 45586900 SAMN38764009 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176411 22234 SRR27176414 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 25949652 SAMN38764006 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176414 22235 SRR27176415 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 30804906 SAMN38764005 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176415 22266 SRR27176451 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal juncus marsh soil 44640432 SAMN38763899 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176451 22292 SRR28820943 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-05 salt marsh soil 133644602 SAMN41100902 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820943 22303 SRR28820981 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-06 salt marsh soil 21464912 SAMN41100723 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820981 22305 SRR28820983 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-11 salt marsh soil 81108664 SAMN41100766 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820983 22310 SRR28820988 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-09 salt marsh soil 24679592 SAMN41100761 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820988 22312 SRR28820991 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-06 salt marsh soil 43042398 SAMN41100735 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28820991 22323 SRR28821005 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-28 salt marsh soil 64257480 SAMN41100875 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821005 22345 SRR28821032 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-14 salt marsh soil 258195994 SAMN41100808 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821032 22354 SRR28821059 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-19 salt marsh soil 74241048 SAMN41100927 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821059 22356 SRR28821069 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2020-12-06 salt marsh soil 91440188 SAMN41100738 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821069 22371 SRR28821110 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-02-01 salt marsh soil 71181082 SAMN41100953 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821110 22373 SRR28821112 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-02-01 salt marsh soil 95193056 SAMN41100951 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821112 21950 SRR5486565 AMPLICON PRJNA384656 Saltmarsh 34.7221N 76.6798W USA:North Carolina\,Rachel Carson Reserve 2010-10-08 salt marsh tidal mudflat 49406840 SAMN06843731 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486565 22021 SRR5486644 AMPLICON PRJNA384656 Saltmarsh 41.5806N 70.5198W USA:Massachusetts\,Waquoit Bay 2010-10-19 salt marsh tidal mudflat 68373906 SAMN06843651 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5486644 21097 SRR8931851 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 39815628 SAMN11463476 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931851 21104 SRR8931859 AMPLICON PRJNA533633 Saltmarsh 45.37N 123.96W USA: Marsh along Netarts Bay\, Oregon 2018-07-05 estuarine sediments 33385008 SAMN11463483 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR8931859 16653 SRR9593117 AMPLICON PRJNA550512 Mangrove 6.8487778 N 101.00833 E Thailand 2017/12/04 Mud estuarine mud 133118514 SAMN12124989 PAIRED Illumina MiSeq METAGENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR9593117