# Export date: 2026-06-15 10:08:39 # Microbe: Rubritalea Rubritalea marina (ID: 9675) # Total amplicons: 69 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19507 ERR2508718 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 20277845 SAMEA1100025 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508718 15066 SRR10393019 AMPLICON PRJNA578400 Mangrove 18.3206508 N 64.7621709 W Virgin Islands: Southern Shore of St. John 2017/07/22 Seawater Northeastern Caribbean Seawater 36758448 SAMN13071660 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR10393019 15096 SRR10393049 AMPLICON PRJNA578400 Mangrove 18.3206508 N 64.7621709 W Virgin Islands: Southern Shore of St. John 2017/07/23 Seawater Northeastern Caribbean Seawater 43792472 SAMN13071632 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR10393049 19919 SRR12033731 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/05/01 Water Seawater 49936500 SAMN15250133 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033731 19922 SRR12033734 AMPLICON PRJNA639819 Seaweed 43N 6.11E France: Porquerolles island north 2017/05/01 Water Seawater 56236500 SAMN15250131 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033734 19924 SRR12033736 AMPLICON PRJNA639819 Seaweed 43.5N 5.54E France: La Seyne 2017/05/01 Water Seawater 45399000 SAMN15250129 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033736 19931 SRR12033743 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/04/01 Water Seawater 67886000 SAMN15250122 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033743 19940 SRR12033752 AMPLICON PRJNA639819 Seaweed 43.7N 6.16E France: La Londe-les-Maures 2017/04/01 Water Seawater 35232000 SAMN15250114 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033752 19964 SRR12033776 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/02/01 Taonia atomaria Seawater 10344544 SAMN15250158 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033776 19983 SRR12033795 AMPLICON PRJNA639819 Seaweed 43.5N 5.54E France: La Seyne 2017/03/01 Water Seawater 43003000 SAMN15250108 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033795 20007 SRR12033819 AMPLICON PRJNA639819 Seaweed 42.59N 6.1E France: Porquerolles island south 2017/05/01 Taonia atomaria Seawater 11734379 SAMN15250203 SINGLE Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12033819 14806 SRR15928123 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 132677248 SAMN21467045 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928123 14809 SRR15928126 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 70727249 SAMN21467042 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928126 14812 SRR15928129 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 80518920 SAMN21467039 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928129 14817 SRR15928134 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 74154127 SAMN21467035 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928134 14823 SRR15928140 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 89056907 SAMN21467029 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928140 14825 SRR15928142 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/11/21 coral coral 78164810 SAMN21467027 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928142 14832 SRR15928149 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/08/21 coral coral 76474458 SAMN21467021 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928149 14834 SRR15928151 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/08/21 coral coral 63766190 SAMN21467019 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928151 14851 SRR15928168 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 50807477 SAMN21467004 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928168 14853 SRR15928170 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 22285989 SAMN21467002 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928170 14858 SRR15928175 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 57169429 SAMN21466997 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928175 14866 SRR15928183 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/07/01 coral coral 10674041 SAMN21466990 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928183 14882 SRR15928199 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2018/05/27 coral coral 48168993 SAMN21466976 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928199 14905 SRR15928222 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2019/02/19 coral coral 174528260 SAMN21467058 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928222 14906 SRR15928223 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2019/02/19 coral coral 175200844 SAMN21467057 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928223 14911 SRR15928228 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2019/02/19 coral coral 195009248 SAMN21467053 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928228 14914 SRR15928231 AMPLICON PRJNA764039 Mangrove 16.3862 S 145.5638 E Australia: GBR 2019/02/19 coral coral 99238684 SAMN21467050 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR15928231 17843 SRR17658360 AMPLICON PRJNA798089 Mangrove 33.8568146 S 151.1966489 E Australia: Illoura Reserve\, Sydney 2020/11/02 marine biofilm biofilm 40791748 SAMN25078399 PAIRED Illumina MiSeq GENOMIC 16S https://www.ncbi.nlm.nih.gov/sra/SRR17658360 23983 SRR19242013 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-04 seagrass seawater 38325000 SAMN28462911 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242013 23984 SRR19242014 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-04 seagrass seawater 37086500 SAMN28462910 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242014 23986 SRR19242016 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-04 seagrass seawater 33452500 SAMN28462909 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242016 24010 SRR19242040 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 51549000 SAMN28462887 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242040 24011 SRR19242041 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 49587000 SAMN28462886 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242041 24012 SRR19242042 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Xincun 2021-01 seagrass seawater 52797000 SAMN28462885 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242042 24013 SRR19242043 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 49367000 SAMN28462884 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242043 24014 SRR19242044 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 49933500 SAMN28462883 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242044 24015 SRR19242045 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 53971500 SAMN28462882 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242045 24022 SRR19242052 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Tanmen 2021-01 seagrass seawater 51879500 SAMN28462876 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242052 24023 SRR19242053 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2021-01 seagrass seawater 51992500 SAMN28462875 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242053 24165 SRR23829620 AMPLICON PRJNA944167 Seagrass 8.160796 S 115.024 E Indonesia: Bali 2011-06 Syringodium isoetifolium plant 28411992 SAMN33739208 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829620 24186 SRR23829641 AMPLICON PRJNA944167 Seagrass 8.160796 S 115.024 E Indonesia: Bali 2011-06 Syringodium isoetifolium plant 32465860 SAMN33739214 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829641 24191 SRR23829646 AMPLICON PRJNA944167 Seagrass 8.160796 S 115.024 E Indonesia: Bali 2011-06 Syringodium isoetifolium plant 57146656 SAMN33739209 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829646 24201 SRR23829656 AMPLICON PRJNA944167 Seagrass 8.160796 S 115.024 E Indonesia: Bali 2011-06 Syringodium isoetifolium plant 28524566 SAMN33739207 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829656 24284 SRR23829739 AMPLICON PRJNA944167 Seagrass 8.160796 S 115.024 E Indonesia: Bali 2011-06 Syringodium isoetifolium plant 26566862 SAMN33739204 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23829739 18185 SRR25047298 AMPLICON PRJNA988256 Mangrove 1.2130 N 103.7569 E Singapore: Semakau 2021/09/07 sediment sediment 70564032 SAMN36011663 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047298 18186 SRR25047299 AMPLICON PRJNA988256 Mangrove 1.2130 N 103.7569 E Singapore: Semakau 2021/09/07 sediment sediment 68935020 SAMN36011662 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047299 18191 SRR25047304 AMPLICON PRJNA988256 Mangrove 1.2130 N 103.7569 E Singapore: Semakau 2021/09/07 plastic plastic 103131630 SAMN36011658 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047304 18200 SRR25047313 AMPLICON PRJNA988256 Mangrove 1.2257 N 103.7464 E Singapore: Pulau Hantu Besar 2021/09/14 plastic plastic 71638602 SAMN36011584 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047313 18203 SRR25047316 AMPLICON PRJNA988256 Mangrove 1.2198 N 103.8506 E Singapore: Bendera Bay 2021/08/11 sediment sediment 62571278 SAMN36011501 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047316 18212 SRR25047325 AMPLICON PRJNA988256 Mangrove 1.2663 N 103.8010 E Singapore: Labrador Park 2021/07/12 seawater seawater 64116612 SAMN36011573 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047325 18213 SRR25047326 AMPLICON PRJNA988256 Mangrove 1.2663 N 103.8010 E Singapore: Labrador Park 2021/07/12 seawater seawater 50038240 SAMN36011572 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047326 18235 SRR25047348 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 seawater seawater 63402640 SAMN36011520 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047348 18237 SRR25047350 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 seawater seawater 82082700 SAMN36011518 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047350 18239 SRR25047352 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 sediment sediment 58712458 SAMN36011517 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047352 18250 SRR25047363 AMPLICON PRJNA988256 Mangrove 1.3752 N 104.0062 E Singapore: Changi Beach 2021/07/26 sediment sediment 60192776 SAMN36011516 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047363 18273 SRR25047386 AMPLICON PRJNA988256 Mangrove 1.2155 N 103.8320 E Singapore: Small Sister's Island 2021/08/12 seawater seawater 67470354 SAMN36011711 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047386 18293 SRR25047406 AMPLICON PRJNA988256 Mangrove 1.2153 N 103.7582 E Singapore: Semakau 2021/08/24 sediment sediment 57224314 SAMN36011692 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047406 18300 SRR25047413 AMPLICON PRJNA988256 Mangrove 1.4450 N 103.7335 E Singapore: Sungei Buloh Wetland Reserve 2021/07/27 seawater seawater 49064204 SAMN36011654 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047413 18328 SRR25047441 AMPLICON PRJNA988256 Mangrove 1.1607 N 103.7407 E Singapore: Raffles Lighthouse 2021/09/07 plastic plastic 86703050 SAMN36011629 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047441 18329 SRR25047442 AMPLICON PRJNA988256 Mangrove 1.4101 N 103.9907 E Singapore: Pulau Ubin Chek Jawa 2021/07/15 seawater seawater 72386286 SAMN36011628 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047442 18331 SRR25047444 AMPLICON PRJNA988256 Mangrove 1.4101 N 103.9907 E Singapore: Pulau Ubin Chek Jawa 2021/07/15 seawater seawater 65149042 SAMN36011626 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047444 18336 SRR25047449 AMPLICON PRJNA988256 Mangrove 1.2198 N 103.8506 E Singapore: Bendera Bay 2021/08/11 seawater seawater 54175184 SAMN36011505 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047449 18347 SRR25047460 AMPLICON PRJNA988256 Mangrove 1.2198 N 103.8506 E Singapore: Bendera Bay 2021/08/11 seawater seawater 62181182 SAMN36011504 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047460 18358 SRR25047471 AMPLICON PRJNA988256 Mangrove 1.2198 N 103.8506 E Singapore: Bendera Bay 2021/08/11 seawater seawater 54699526 SAMN36011503 PAIRED Illumina MiSeq GENOMIC 16S、18S https://www.ncbi.nlm.nih.gov/sra/SRR25047471 15980 SRR7585805 AMPLICON PRJNA415044 Mangrove 22.20 N 39.17 E Saudi Arabia: Thuwal 2025/02/17 Mangrove Sediment 20557654 SAMN09700085 PAIRED Illumina MiSeq METAGENOMIC 16S、ITS https://www.ncbi.nlm.nih.gov/sra/SRR7585805 22987 SRR7633184 AMPLICON PRJNA483963 Seagrass 32.66 N 117.15 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 26493252 SAMN09754509 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633184 22997 SRR7633194 AMPLICON PRJNA483963 Seagrass 32.66 N 117.15 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 18544914 SAMN09754513 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633194 23018 SRR7633215 AMPLICON PRJNA483963 Seagrass 32.69 N 117.22 W USA: San Diego\, CA. 2017-07-03 seagrass seawater 22801906 SAMN09754530 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR7633215