# Export date: 2026-06-14 18:15:41 # Microbe: Prosthecobacter Prosthecobacter sp002279765 (ID: 9684) # Total amplicons: 67 # Field descriptions: # id: id # run: Run ID, e.g., SRR15928122 # assay_type: Sequencing assay type, e.g., AMPLICON # bioproject: Bioproject ID, e.g., PRJNA764039 # habitat: Habitat type, e.g., Mangrove # latitude: Latitude, e.g., 16.3862 S # longitude: Longitude, e.g., 145.5638 E # geo_location: Geographic location, e.g., Australia: GBR # collection_date: Collection date # host: Host, e.g., coral # sample_isolated: Sample isolated from, e.g., coral # bases: Number of bases # biosample: Biosample ID, e.g., SAMN21467046 # layout: Sequencing layout, e.g., PAIRED # instrument: Sequencing instrument, e.g., Illumina MiSeq # library_source: Library source, e.g., GENOMIC # amplicon_type: Amplicon type, e.g., 16S # reference: Reference link, e.g., https://www.ncbi.nlm.nih.gov/sra/SRR15928122 #-------------------------------------------------------------------------------- id run assay_type bioproject habitat latitude longitude geo_location collection_date host sample_isolated bases biosample layout instrument library_source amplicon_type reference 19532 ERR2508744 AMPLICON PRJEB25951 Seaweed 51.654817N 122.889612W CAN:Calvert 2016/08/01 biofilm 10915615 SAMEA1100051 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508744 19596 ERR2508808 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 9153957 SAMEA1100116 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508808 19605 ERR2508817 AMPLICON PRJEB25951 Seaweed 49.291801N 122.889612W CAN:Calvert 2016-03,2016-08 biofilm 15144466 SAMEA1100126 SINGLE Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/ERR2508817 21159 SRR11233075 AMPLICON PRJNA602775 Saltmarsh 41.7124N 69.9959W USA: Harwich\, MA Muddy Creek Marsh 2015-06-07 sediment 23974204 SAMN13950654 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233075 21162 SRR11233085 AMPLICON PRJNA602775 Saltmarsh 41.7129N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2015-08-19 sediment 27178479 SAMN13950645 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233085 21163 SRR11233086 AMPLICON PRJNA602775 Saltmarsh 41.7123N 69.9956W USA: Harwich\, MA Muddy Creek Marsh 2015-08-19 sediment 24576052 SAMN13950644 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233086 20857 SRR11233117 AMPLICON PRJNA602775 Saltmarsh 41.123N 69.996W USA: Harwich\, MA Muddy Creek Marsh 2015-11-04 sediment 18069639 SAMN13950530 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR11233117 20624 SRR12228834 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 554476500 SAMN10953576 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228834 20625 SRR12228835 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 123993000 SAMN10953575 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228835 20626 SRR12228836 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus alterniflorus rhizosphere 206085000 SAMN10953557 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228836 20627 SRR12228837 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus anglicus rhizosphere 106605500 SAMN10953574 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228837 20633 SRR12228845 AMPLICON PRJNA518897 Saltmarsh 48.117679N 1.639944W France: Rennes 2016-01-27 Sporobolus maritimus rhizosphere 32079000 SAMN10953566 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12228845 20902 SRR12852709 AMPLICON PRJNA670253 Saltmarsh 30.05833N 89.79194W USA: New Orleans\, LA 2018-06-15 sediment 52012359 SAMN16490727 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852709 21209 SRR12852717 AMPLICON PRJNA670253 Saltmarsh 30.417349N 87.828499W USA: Weeks Bay\, AL 2018-06-18 sediment 35820826 SAMN16490915 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852717 20994 SRR12852875 AMPLICON PRJNA670253 Saltmarsh 30.417349N 87.828499W USA: Weeks Bay\, AL 2018-06-18 sediment 5996318 SAMN16490749 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR12852875 20734 SRR13380093 AMPLICON PRJNA690562 Saltmarsh 30.26194444N 88.23833333W USA: Alabama 2015-07 Salt marsh sediment 17673958 SAMN17251781 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR13380093 24051 SRR19242081 AMPLICON PRJNA838654 Seagrass NA China:Hainan\,Yongxing Island 2020-08 seagrass seawater 40229500 SAMN28462832 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR19242081 22031 SRR22025437 AMPLICON PRJNA893704 Saltmarsh 38.72246N 76.33719W USA: Chesapeake Bay 2019-06-28 Spartina alterniflora peat soil 137840869 SAMN31431893 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025437 22063 SRR22025473 AMPLICON PRJNA893704 Saltmarsh 38.74644N 76.36811W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 62701398 SAMN31431860 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025473 22087 SRR22025498 AMPLICON PRJNA893704 Saltmarsh 38.76908N 76.3786W USA: Chesapeake Bay 2019-07-12 Spartina alterniflora peat soil 63912968 SAMN31431837 PAIRED Illumina MiSeq GENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR22025498 22094 SRR23933687 AMPLICON PRJNA925448 Saltmarsh 44.570643N 67.912657W USA: Cherryfield\, Maine 2021-06-24 marsh sediment 34360896 SAMN33188433 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933687 22100 SRR23933743 AMPLICON PRJNA925448 Saltmarsh 44.616826N 67.802903W USA: Harrington\, Maine 2021-06-25 marsh sediment 135641404 SAMN33188457 PAIRED Illumina NovaSeq 6000 METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR23933743 22151 SRR27176323 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 73883696 SAMN38763950 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176323 22154 SRR27176326 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 84517418 SAMN38763947 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176326 22155 SRR27176327 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 bottomland hardwood forest soil 48971716 SAMN38763946 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176327 22201 SRR27176380 AMPLICON PRJNA1051103 Saltmarsh 30.43N 87.57W USA: Alabama\, Mobile 2021-04-21 tidal shrub marsh soil 24656488 SAMN38763993 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR27176380 22387 SRR28821128 AMPLICON PRJNA1105352 Saltmarsh 30.14N 89.37W USA:Louisiana 2021-01-05 salt marsh soil 113315664 SAMN41100908 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR28821128 21685 SRR5360913 AMPLICON PRJNA379357 Saltmarsh 53.76256N 7.72358E Germany: Spiekeroog 2015 Salt marsh sediment 150026186 SAMN06606325 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5360913 22781 SRR5675546 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 17599324 SAMN07197202 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675546 22782 SRR5675547 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 12467158 SAMN07197203 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675547 22783 SRR5675548 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 18096643 SAMN07197194 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675548 22784 SRR5675549 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 30443461 SAMN07197195 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675549 22785 SRR5675550 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10519130 SAMN07197196 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675550 22786 SRR5675551 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10473549 SAMN07197197 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675551 22787 SRR5675552 AMPLICON PRJNA389390 Seagrass 54.60116 N 13.15891 E Germany:Baltic Sea 2015-08 Zostera marina seawater 32450226 SAMN07197198 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675552 22788 SRR5675553 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10928396 SAMN07197199 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675553 22789 SRR5675554 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10442792 SAMN07197200 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675554 22790 SRR5675555 AMPLICON PRJNA389390 Seagrass 54.59808 N 13.21117 E Germany:Baltic Sea 2015-08 Zostera marina seawater 19834392 SAMN07197201 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675555 22801 SRR5675566 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 8392860 SAMN07197209 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675566 22803 SRR5675568 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 5407483 SAMN07197211 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675568 22805 SRR5675570 AMPLICON PRJNA389390 Seagrass 54.61305 N 13.17829 E Germany:Baltic Sea 2015-08 Zostera marina seawater 19930464 SAMN07197205 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675570 22806 SRR5675571 AMPLICON PRJNA389390 Seagrass 54.61305 N 13.17829 E Germany:Baltic Sea 2015-08 Zostera marina seawater 14026452 SAMN07197204 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675571 22807 SRR5675572 AMPLICON PRJNA389390 Seagrass 54.61305 N 13.17829 E Germany:Baltic Sea 2015-08 Zostera marina seawater 17179024 SAMN07197207 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675572 22808 SRR5675573 AMPLICON PRJNA389390 Seagrass 54.61305 N 13.17829 E Germany:Baltic Sea 2015-08 Zostera marina seawater 16796799 SAMN07197206 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675573 22809 SRR5675574 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10623320 SAMN07197213 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675574 22810 SRR5675575 AMPLICON PRJNA389390 Seagrass 54.51641 N 13.13775 E Germany:Baltic Sea 2015-08 Zostera marina seawater 11522743 SAMN07197212 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675575 22823 SRR5675588 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 18917767 SAMN07197218 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675588 22825 SRR5675590 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20472014 SAMN07197216 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675590 22826 SRR5675591 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 4094255 SAMN07197217 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675591 22827 SRR5675592 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 13665110 SAMN07197214 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675592 22828 SRR5675593 AMPLICON PRJNA389390 Seagrass 54.51144 N 13.14459 E Germany:Baltic Sea 2015-08 Zostera marina seawater 24826961 SAMN07197215 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR5675593 22851 SRR5675616 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20353364 SAMN07197192 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675616 22852 SRR5675617 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 10156763 SAMN07197193 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675617 22853 SRR5675618 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 38210475 SAMN07197188 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675618 22854 SRR5675619 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 36711782 SAMN07197189 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675619 22855 SRR5675620 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 21510332 SAMN07197190 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675620 22856 SRR5675621 AMPLICON PRJNA389390 Seagrass 54.55705 N 13.13677 E Germany:Baltic Sea 2015-08 Zostera marina seawater 15826462 SAMN07197191 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675621 22857 SRR5675622 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 44484443 SAMN07197184 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675622 22858 SRR5675623 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 34652334 SAMN07197185 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675623 22859 SRR5675624 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 20173631 SAMN07197186 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675624 22860 SRR5675625 AMPLICON PRJNA389390 Seagrass 54.57827 N 13.12357 E Germany:Baltic Sea 2015-08 Zostera marina seawater 32378579 SAMN07197187 PAIRED Illumina MiSeq METAGENOMIC https://www.ncbi.nlm.nih.gov/sra/SRR5675625 21760 SRR7877445 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-07 Salt marsh sediment 36114467 SAMN10092140 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877445 21762 SRR7877447 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-08-22 Salt marsh sediment 47811864 SAMN10092146 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877447 21804 SRR7877493 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-06-26 Salt marsh sediment 39504527 SAMN10092055 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877493 21805 SRR7877494 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-06-26 Salt marsh sediment 26053585 SAMN10092054 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877494 21865 SRR7877561 AMPLICON PRJNA491859 Saltmarsh 42.7488N 70.5811W USA: Rough Meadows Marsh\, Rowley\, Massachusetts 2015-06-26 Salt marsh sediment 48259354 SAMN10092066 PAIRED Illumina MiSeq METAGENOMIC 16s https://www.ncbi.nlm.nih.gov/sra/SRR7877561